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  5. Gb_03562

Gb_03562 (ATCYP20-2, CYP20-2)


Aliases : ATCYP20-2, CYP20-2

Description : component PnsL5 of NDH lumen subcomplex L. protein folding catalyst


Gene families : OG0000219 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000219_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_03562
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AT3G62030 ROC4 rotamase CYP 4 0.03 OrthoFinder output from all 47 species
Aop_g68502 ROC5, ATCYP1 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Cre01.g002300 No alias Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
Cre12.g495951 ATCYP20-2, CYP20-2 Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
GSVIVT01000919001 ATCYP20-2, CYP20-2 Protein modification.protein folding and quality... 0.03 OrthoFinder output from all 47 species
Gb_11492 ROC3 protein folding catalyst 0.03 OrthoFinder output from all 47 species
Pir_g55179 ROC7 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g009990.3.1 ATCYP20-2,... component PnsL5 of NDH lumen subcomplex L. protein... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEA Interproscan
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0047429 nucleoside triphosphate diphosphatase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 95 250
No external refs found!