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  5. Gb_01826

Gb_01826 (HCF101)


Aliases : HCF101

Description : HCF101 protein involved in PS-I assembly


Gene families : OG0004803 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004803_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_01826
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00142p00060790 HCF101,... Coenzyme metabolism.iron-sulfur cluster assembly... 0.07 OrthoFinder output from all 47 species
AT3G24430 HCF101 ATP binding 0.08 OrthoFinder output from all 47 species
Adi_g075712 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.03 OrthoFinder output from all 47 species
Aev_g11015 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.08 OrthoFinder output from all 47 species
Als_g18429 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.03 OrthoFinder output from all 47 species
Aob_g14161 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.04 OrthoFinder output from all 47 species
Aop_g25561 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.09 OrthoFinder output from all 47 species
Azfi_s0032.g024765 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.05 OrthoFinder output from all 47 species
Ceric.05G039700.1 HCF101, Ceric.05G039700 scaffold protein HCF101 of plastidial SUF system... 0.05 OrthoFinder output from all 47 species
Cre01.g045902 HCF101 Coenzyme metabolism.iron-sulfur cluster assembly... 0.03 OrthoFinder output from all 47 species
Dac_g13357 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.09 OrthoFinder output from all 47 species
Ehy_g06869 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.06 OrthoFinder output from all 47 species
GSVIVT01015424001 HCF101 Coenzyme metabolism.iron-sulfur cluster assembly... 0.06 OrthoFinder output from all 47 species
LOC_Os01g52170.1 HCF101, LOC_Os01g52170 HCF101 protein involved in PS-I assembly. scaffold... 0.09 OrthoFinder output from all 47 species
Len_g45512 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.1 OrthoFinder output from all 47 species
Lfl_g12880 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.05 OrthoFinder output from all 47 species
Mp3g25470.1 HCF101 HCF101 protein involved in PS-I assembly. scaffold... 0.03 OrthoFinder output from all 47 species
Msp_g12150 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.05 OrthoFinder output from all 47 species
Ore_g30871 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.04 OrthoFinder output from all 47 species
Pp3c19_20070V3.1 HCF101, Pp3c19_20070 ATP binding 0.02 OrthoFinder output from all 47 species
Ppi_g57975 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.06 OrthoFinder output from all 47 species
Sam_g25149 No alias scaffold protein HCF101 of plastidial SUF system... 0.05 OrthoFinder output from all 47 species
Smo91144 HCF101 Coenzyme metabolism.iron-sulfur cluster assembly... 0.07 OrthoFinder output from all 47 species
Solyc12g007010.2.1 HCF101, Solyc12g007010 HCF101 protein involved in PS-I assembly. scaffold... 0.08 OrthoFinder output from all 47 species
Spa_g12261 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.1 OrthoFinder output from all 47 species
Tin_g02764 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.07 OrthoFinder output from all 47 species
Zm00001e008773_P004 HCF101, Zm00001e008773 HCF101 protein involved in PS-I assembly. scaffold... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR033756 YlxH/NBP35 1 121
IPR010376 GBBH-like_N 160 225
No external refs found!