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Description : no hits & (original description: none)
Gene families : OG0002719 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002719_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_01281 | |
| Cluster | HCCA: Cluster_41 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00190880 | evm_27.TU.AmTr_v1... | No description available | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g018403 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g018524 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g077934 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g117666 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g13256 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g15247 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g19097 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0060.g034750 | No alias | not classified & original description: CDS=32-3943 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g17171 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.08G054400.1 | Ceric.08G054400 | not classified & original description: pacid=50638201... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g04146 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g23055 | No alias | not classified & original description: none | 0.12 | OrthoFinder output from all 47 species | |
| GSVIVT01024823001 | No alias | No description available | 0.06 | OrthoFinder output from all 47 species | |
| Len_g24505 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07443 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| MA_10426020g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g42721 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g06792 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g15096 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g18248 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g37630 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g37822 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g11567 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g25693 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g32815 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0109.g020564 | No alias | not classified & original description: CDS=1-2943 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g40488 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g031650.3.1 | Solyc09g031650 | no hits & (original description: none) | 0.12 | OrthoFinder output from all 47 species | |
| Spa_g04875 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g03800 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g45301 | PARL1, ATNUC-L1, NUC-L1 | regulatory protein *(NCL) of rRNA transcription &... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e027931_P001 | Zm00001e027931 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006354 | DNA-templated transcription elongation | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| BP | GO:0006368 | transcription elongation by RNA polymerase II | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| CC | GO:0008023 | transcription elongation factor complex | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| CC | GO:0016593 | Cdc73/Paf1 complex | IEP | HCCA |
| MF | GO:0017069 | snRNA binding | IEP | HCCA |
| MF | GO:0017070 | U6 snRNA binding | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| MF | GO:0030623 | U5 snRNA binding | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |