Cpa|evm.model.tig00021357.33 (CLC-D, ATCLC-D)

Aliases : CLC-D, ATCLC-D

Description : Chloride channel protein CLC-d OS=Arabidopsis thaliana

Gene families : OG0000501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000501_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00021357.33

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00103p00080940	CLC-D, ATCLC-D,...	Solute transport.carrier-mediated transport.CLC anion...	0.02	OrthoFinder output from all 47 species
AT5G26240	CLC-D, ATCLC-D	chloride channel D	0.01	OrthoFinder output from all 47 species
AT5G49890	ATCLC-C, CLC-C	chloride channel C	0.01	OrthoFinder output from all 47 species
Als_g29133	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.01	OrthoFinder output from all 47 species
Aop_g06086	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.01	OrthoFinder output from all 47 species
Aspi01Gene19324.t1	ATCLC-C, CLC-C,...	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene26268.t1	ATCLC-C, CLC-C,...	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species
Azfi_s0019.g015167	CLC-D, ATCLC-D	anion channel / anion:proton antiporter *(CLC) &...	0.01	OrthoFinder output from all 47 species
Cba_g72514	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.01	OrthoFinder output from all 47 species
Ceric.03G047600.1	ATCLC-C, CLC-C,...	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Dac_g16210	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Mp1g24100.1	CLC-D, ATCLC-D	anion channel / anion:proton antiporter (CLC)	0.01	OrthoFinder output from all 47 species
Ore_g06518	CLC-D, ATCLC-D	anion channel / anion:proton antiporter *(CLC) &...	0.01	OrthoFinder output from all 47 species
Pir_g01369	CLC-D, ATCLC-D	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Ppi_g09783	CLC-D, ATCLC-D	anion channel / anion:proton antiporter *(CLC) &...	0.01	OrthoFinder output from all 47 species
Sam_g51279	No alias	anion channel / anion:proton antiporter *(CLC) &...	0.01	OrthoFinder output from all 47 species
Spa_g04607	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Zm00001e005338_P001	CLC-D, ATCLC-D,...	anion channel / anion:proton antiporter (CLC)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
MF	GO:0005244	voltage-gated monoatomic ion channel activity	None	Extended
MF	GO:0005247	voltage-gated chloride channel activity	IEA	Interproscan
MF	GO:0005253	monoatomic anion channel activity	None	Extended
MF	GO:0005254	chloride channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006820	monoatomic anion transport	None	Extended
BP	GO:0006821	chloride transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008308	voltage-gated monoatomic anion channel activity	None	Extended
MF	GO:0008509	monoatomic anion transmembrane transporter activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015103	inorganic anion transmembrane transporter activity	None	Extended
MF	GO:0015108	chloride transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015698	inorganic anion transport	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022832	voltage-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022839	monoatomic ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004559	alpha-mannosidase activity	IEP	HCCA
MF	GO:0004571	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
BP	GO:0006869	lipid transport	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
MF	GO:0015923	mannosidase activity	IEP	HCCA
MF	GO:0015924	mannosyl-oligosaccharide mannosidase activity	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
BP	GO:0042157	lipoprotein metabolic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001807	Cl-channel_volt-gated	233	603
IPR000644	CBS_dom	861	905

External Links

No external refs found!

Cpa|evm.model.tig00021357.33 (CLC-D, ATCLC-D)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation