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  5. Cpa|evm.model.tig00021348.92

Cpa|evm.model.tig00021348.92


Description : Obg-like ATPase 1 OS=Arabidopsis thaliana


Gene families : OG0004730 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004730_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021348.92
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AT1G30580 No alias GTP binding 0.02 OrthoFinder output from all 47 species
Aob_g06477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07917 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0078.g038274 No alias not classified & original description: CDS=221-1405 0.01 OrthoFinder output from all 47 species
Ceric.10G043200.1 Ceric.10G043200 not classified & original description: pacid=50612448... 0.04 OrthoFinder output from all 47 species
Dcu_g02850 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os08g09940.1 LOC_Os08g09940 Obg-like ATPase 1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_103044g0010 No alias Obg-like ATPase 1 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Mp5g19640.1 No alias Obg-like ATPase 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g11283 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g04134 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004593 No alias not classified & original description: CDS=1-1185 0.02 OrthoFinder output from all 47 species
Solyc02g023970.3.1 Solyc02g023970 Obg-like ATPase 1 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Spa_g19285 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g54780 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g43677 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e039990_P002 Zm00001e039990 Obg-like ATPase 1 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004826 phenylalanine-tRNA ligase activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
MF GO:0005548 phospholipid transporter activity IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015914 phospholipid transport IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR013029 YchF_C 284 367
IPR006073 GTP-bd 35 122
No external refs found!