Aliases : HCF173
No description available
Gene families : OG0006399 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006399_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cpa|evm.model.tig00020830.55 | |
Cluster | HCCA: Cluster_29 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g026392 | HCF173 | protein involved in PS-II assembly *(HCF173) & original... | 0.02 | OrthoFinder output from all 47 species | |
Ala_g08503 | HCF173 | protein involved in PS-II assembly *(HCF173) & original... | 0.02 | OrthoFinder output from all 47 species | |
Als_g18490 | HCF173 | protein involved in PS-II assembly *(HCF173) & original... | 0.01 | OrthoFinder output from all 47 species | |
Aob_g05244 | HCF173 | protein involved in PS-II assembly *(HCF173) & original... | 0.01 | OrthoFinder output from all 47 species | |
Aop_g05654 | HCF173 | protein involved in PS-II assembly *(HCF173) & original... | 0.02 | OrthoFinder output from all 47 species | |
Cba_g03951 | HCF173 | protein involved in PS-II assembly *(HCF173) & original... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.24G028300.1 | HCF173, Ceric.24G028300 | protein involved in PS-II assembly *(HCF173) & original... | 0.01 | OrthoFinder output from all 47 species | |
Cre13.g578650 | HCF173 | Photosynthesis.photophosphorylation.photosystem... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g00930 | HCF173 | protein involved in PS-II assembly *(HCF173) & original... | 0.01 | OrthoFinder output from all 47 species | |
Dde_g21297 | HCF173 | protein involved in PS-II assembly *(HCF173) & original... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g25310 | HCF173 | protein involved in PS-II assembly *(HCF173) & original... | 0.01 | OrthoFinder output from all 47 species | |
GSVIVT01029443001 | HCF173 | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
Gb_02290 | HCF173 | HCF173 protein involved in PS-II assembly | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g04510.1 | HCF173, LOC_Os02g04510 | HCF173 protein involved in PS-II assembly | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os06g49120.1 | HCF173, LOC_Os06g49120 | HCF173 protein involved in PS-II assembly | 0.03 | OrthoFinder output from all 47 species | |
Len_g03320 | HCF173 | protein involved in PS-II assembly *(HCF173) & original... | 0.03 | OrthoFinder output from all 47 species | |
MA_21385g0010 | HCF173 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
Mp3g04800.1 | HCF173 | HCF173 protein involved in PS-II assembly | 0.01 | OrthoFinder output from all 47 species | |
Msp_g10500 | HCF173 | protein involved in PS-II assembly *(HCF173) & original... | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g01268 | HCF173 | protein involved in PS-II assembly *(HCF173) & original... | 0.01 | OrthoFinder output from all 47 species | |
Ore_g17922 | HCF173 | protein involved in PS-II assembly *(HCF173) & original... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g20180 | HCF173 | protein involved in PS-II assembly *(HCF173) & original... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g16606 | HCF173 | protein involved in PS-II assembly *(HCF173) & original... | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0038.g011911 | HCF173 | protein involved in PS-II assembly *(HCF173) & original... | 0.01 | OrthoFinder output from all 47 species | |
Smo183274 | HCF173 | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g26192 | HCF173 | protein involved in PS-II assembly *(HCF173) & original... | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e013206_P002 | HCF173, Zm00001e013206 | HCF173 protein involved in PS-II assembly | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004134 | 4-alpha-glucanotransferase activity | IEP | HCCA |
MF | GO:0004180 | carboxypeptidase activity | IEP | HCCA |
MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0004827 | proline-tRNA ligase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006433 | prolyl-tRNA aminoacylation | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
MF | GO:0010181 | FMN binding | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016209 | antioxidant activity | IEP | HCCA |
MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0031072 | heat shock protein binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
MF | GO:0051213 | dioxygenase activity | IEP | HCCA |
BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
MF | GO:0070008 | serine-type exopeptidase activity | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
No external refs found! |