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  5. Cpa|evm.model.tig00020684.39

Cpa|evm.model.tig00020684.39 (ISPD, ATMEPCT, MCT)


Aliases : ISPD, ATMEPCT, MCT

Description : Secondary metabolism.terpenoids.methylerythritol phosphate pathway.4-diphosphocytidyl-2-C-methyl-D-erythritol synthase


Gene families : OG0005475 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005475_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020684.39

Target Alias Description ECC score Gene Family Method Actions
AT2G02500 ISPD, ATMEPCT, MCT Nucleotide-diphospho-sugar transferases superfamily protein 0.01 OrthoFinder output from all 47 species
Aspi01Gene30874.t1 ISPD, ATMEPCT,... 4-diphosphocytidyl-2-C-methyl-D-erythritol synthase &... 0.02 OrthoFinder output from all 47 species
Cre16.g679669 ISPD, ATMEPCT, MCT Secondary metabolism.terpenoids.methylerythritol... 0.03 OrthoFinder output from all 47 species
Dde_g00400 ISPD, ATMEPCT, MCT 4-diphosphocytidyl-2-C-methyl-D-erythritol synthase &... 0.01 OrthoFinder output from all 47 species
LOC_Os01g66360.1 ISPD, ATMEPCT,... 4-diphosphocytidyl-2-C-methyl-D-erythritol synthase 0.02 OrthoFinder output from all 47 species
Mp3g06780.1 ISPD, ATMEPCT, MCT 4-diphosphocytidyl-2-C-methyl-D-erythritol synthase 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001826 ISPD, ATMEPCT, MCT 4-diphosphocytidyl-2-C-methyl-D-erythritol synthase &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0070567 cytidylyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004817 cysteine-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR034683 IspD/TarI 110 319
No external refs found!