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  5. Cpa|evm.model.tig00020614.90

Cpa|evm.model.tig00020614.90 (THH1)


Aliases : THH1

No description available


Gene families : OG0000961 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000961_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020614.90
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Aev_g24309 TOM3 tobamovirus multiplication replication host factor... 0.02 OrthoFinder output from all 47 species
Aob_g03943 TOM1, ATTOM1 tobamovirus multiplication replication host factor... 0.02 OrthoFinder output from all 47 species
Aob_g06468 TOM1, ATTOM1 tobamovirus multiplication replication host factor... 0.01 OrthoFinder output from all 47 species
Cba_g15397 TOM1, ATTOM1 tobamovirus multiplication replication host factor... 0.01 OrthoFinder output from all 47 species
Gb_34342 TOM3 TOM1 tobamovirus multiplication replication host factor 0.01 OrthoFinder output from all 47 species
LOC_Os10g39220.1 TOM3, LOC_Os10g39220 TOM1 tobamovirus multiplication replication host factor 0.02 OrthoFinder output from all 47 species
Mp3g00660.1 TOM3 TOM1 tobamovirus multiplication replication host factor 0.02 OrthoFinder output from all 47 species
Nbi_g06641 TOM1, ATTOM1 tobamovirus multiplication replication host factor... 0.02 OrthoFinder output from all 47 species
Sam_g09524 No alias tobamovirus multiplication replication host factor... 0.01 OrthoFinder output from all 47 species
Spa_g12346 TOM1, ATTOM1 tobamovirus multiplication replication host factor... 0.01 OrthoFinder output from all 47 species
Spa_g17619 TOM1, ATTOM1 tobamovirus multiplication replication host factor... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR009457 THH1/TOM1/TOM3_dom 18 105
No external refs found!