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  5. Cpa|evm.model.tig00020538.62

Cpa|evm.model.tig00020538.62


Description : Redox homeostasis.cytosol/mitochondrion/nucleus redox homeostasis.nucleoredoxin


Gene families : OG0001689 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001689_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020538.62
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Cre02.g093750 No alias Redox homeostasis.cytosol/mitochondrion/nucleus redox... 0.03 OrthoFinder output from all 47 species
Cre02.g093800 No alias Redox homeostasis.cytosol/mitochondrion/nucleus redox... 0.03 OrthoFinder output from all 47 species
Gb_39281 No alias nucleoredoxin 0.01 OrthoFinder output from all 47 species
LOC_Os04g51920.1 LOC_Os04g51920 nucleoredoxin 0.01 OrthoFinder output from all 47 species
MA_10433815g0020 No alias nucleoredoxin 0.01 OrthoFinder output from all 47 species
Smo143457 No alias Redox homeostasis.cytosol/mitochondrion/nucleus redox... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR012336 Thioredoxin-like_fold 168 225
IPR012336 Thioredoxin-like_fold 26 118
No external refs found!