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Aliases : PHYC
Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor
Gene families : OG0000699 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000699_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00020510.131 | |
| Cluster | HCCA: Cluster_72 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cba_g22887 | HY3, OOP1, PHYB | temperature sensor protein *(PHY-B) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g36588 | HY3, OOP1, PHYB | temperature sensor protein *(PHY-B) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| MA_10435530g0010 | HY3, OOP1, PHYB | phytochrome photoreceptor (PHY). temperature sensor... | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0003950 | NAD+ ADP-ribosyltransferase activity | IEP | HCCA |
| MF | GO:0005227 | calcium activated cation channel activity | IEP | HCCA |
| MF | GO:0005261 | monoatomic cation channel activity | IEP | HCCA |
| MF | GO:0005267 | potassium channel activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006813 | potassium ion transport | IEP | HCCA |
| MF | GO:0008374 | O-acyltransferase activity | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015269 | calcium-activated potassium channel activity | IEP | HCCA |
| MF | GO:0016286 | small conductance calcium-activated potassium channel activity | IEP | HCCA |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
| MF | GO:0016763 | pentosyltransferase activity | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| MF | GO:0022836 | gated channel activity | IEP | HCCA |
| MF | GO:0022839 | monoatomic ion gated channel activity | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| No external refs found! |