Cpa|evm.model.tig00001466.9 (PAG1)

Aliases : PAG1

Description : Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-7 component

Gene families : OG0004146 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004146_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00001466.9

Target	Alias	Description	ECC score	Gene Family Method
AT2G27020	PAG1	20S proteasome alpha subunit G1	0.02	OrthoFinder output from all 47 species
Azfi_s0090.g042757	PAG1	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.01	OrthoFinder output from all 47 species
Mp8g09510.1	PAG1	component alpha type-7 of 26S proteasome	0.02	OrthoFinder output from all 47 species
Nbi_g34726	PAG1	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Solyc10g081130.2.1	PAG1, Solyc10g081130	component alpha type-7 of 26S proteasome	0.02	OrthoFinder output from all 47 species
Spa_g49419	PAG1	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEA	Interproscan
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000075	cell cycle checkpoint signaling	IEP	HCCA
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	HCCA
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	HCCA
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	HCCA
CC	GO:0000428	DNA-directed RNA polymerase complex	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003729	mRNA binding	IEP	HCCA
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	HCCA
MF	GO:0004725	protein tyrosine phosphatase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
CC	GO:0005666	RNA polymerase III complex	IEP	HCCA
CC	GO:0005681	spliceosomal complex	IEP	HCCA
CC	GO:0005685	U1 snRNP	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006376	mRNA splice site selection	IEP	HCCA
BP	GO:0006383	transcription by RNA polymerase III	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0007088	regulation of mitotic nuclear division	IEP	HCCA
BP	GO:0007093	mitotic cell cycle checkpoint signaling	IEP	HCCA
BP	GO:0007094	mitotic spindle assembly checkpoint signaling	IEP	HCCA
BP	GO:0007346	regulation of mitotic cell cycle	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
BP	GO:0010564	regulation of cell cycle process	IEP	HCCA
BP	GO:0010639	negative regulation of organelle organization	IEP	HCCA
BP	GO:0010948	negative regulation of cell cycle process	IEP	HCCA
BP	GO:0010965	regulation of mitotic sister chromatid separation	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
BP	GO:0022402	cell cycle process	IEP	HCCA
BP	GO:0022618	ribonucleoprotein complex assembly	IEP	HCCA
BP	GO:0030071	regulation of mitotic metaphase/anaphase transition	IEP	HCCA
CC	GO:0030532	small nuclear ribonucleoprotein complex	IEP	HCCA
CC	GO:0030880	RNA polymerase complex	IEP	HCCA
BP	GO:0031577	spindle checkpoint signaling	IEP	HCCA
BP	GO:0033043	regulation of organelle organization	IEP	HCCA
BP	GO:0033044	regulation of chromosome organization	IEP	HCCA
BP	GO:0033045	regulation of sister chromatid segregation	IEP	HCCA
BP	GO:0033046	negative regulation of sister chromatid segregation	IEP	HCCA
BP	GO:0033047	regulation of mitotic sister chromatid segregation	IEP	HCCA
BP	GO:0033048	negative regulation of mitotic sister chromatid segregation	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0045786	negative regulation of cell cycle	IEP	HCCA
BP	GO:0045839	negative regulation of mitotic nuclear division	IEP	HCCA
BP	GO:0045841	negative regulation of mitotic metaphase/anaphase transition	IEP	HCCA
BP	GO:0045930	negative regulation of mitotic cell cycle	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA
BP	GO:0048523	negative regulation of cellular process	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
BP	GO:0051129	negative regulation of cellular component organization	IEP	HCCA
BP	GO:0051726	regulation of cell cycle	IEP	HCCA
BP	GO:0051783	regulation of nuclear division	IEP	HCCA
BP	GO:0051784	negative regulation of nuclear division	IEP	HCCA
BP	GO:0051983	regulation of chromosome segregation	IEP	HCCA
BP	GO:0051985	negative regulation of chromosome segregation	IEP	HCCA
CC	GO:0055029	nuclear DNA-directed RNA polymerase complex	IEP	HCCA
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0071173	spindle assembly checkpoint signaling	IEP	HCCA
BP	GO:0071174	mitotic spindle checkpoint signaling	IEP	HCCA
BP	GO:0071826	ribonucleoprotein complex subunit organization	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
CC	GO:0097525	spliceosomal snRNP complex	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
CC	GO:0120114	Sm-like protein family complex	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1901987	regulation of cell cycle phase transition	IEP	HCCA
BP	GO:1901988	negative regulation of cell cycle phase transition	IEP	HCCA
BP	GO:1901990	regulation of mitotic cell cycle phase transition	IEP	HCCA
BP	GO:1901991	negative regulation of mitotic cell cycle phase transition	IEP	HCCA
BP	GO:1902099	regulation of metaphase/anaphase transition of cell cycle	IEP	HCCA
BP	GO:1902100	negative regulation of metaphase/anaphase transition of cell cycle	IEP	HCCA
BP	GO:1903047	mitotic cell cycle process	IEP	HCCA
BP	GO:1905818	regulation of chromosome separation	IEP	HCCA
BP	GO:1905819	negative regulation of chromosome separation	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA
BP	GO:2000816	negative regulation of mitotic sister chromatid separation	IEP	HCCA
BP	GO:2001251	negative regulation of chromosome organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001353	Proteasome_sua/b	32	216
IPR000426	Proteasome_asu_N	8	30

External Links

No external refs found!

Cpa|evm.model.tig00001466.9 (PAG1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation