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  5. Cpa|evm.model.tig00001336.15

Cpa|evm.model.tig00001336.15


Description : Cytoskeleton.microfilament network.actin polymerisation.formin actin filament elongation factor activities.group-II formin


Gene families : OG0000743 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000743_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001336.15
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AT3G32420 No alias No description available 0.02 OrthoFinder output from all 47 species
Aev_g48811 AFH14 group-II formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
Aop_g42606 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene34946.t1 AFH14, Aspi01Gene34946 group-II formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
MA_642077g0010 AFH14 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Sam_g18629 No alias group-II formin actin filament elongation factor &... 0.01 OrthoFinder output from all 47 species
Smo404363 AFH14 Formin-like protein 6 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR015425 FH2_Formin 520 800
No external refs found!