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  5. Cpa|evm.model.tig00001164.2

Cpa|evm.model.tig00001164.2 (OVA5, ATKRS-2)


Aliases : OVA5, ATKRS-2

Description : Lysine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana


Gene families : OG0005865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005865_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001164.2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00089p00093330 OVA5, ATKRS-2,... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.01 OrthoFinder output from all 47 species
Ceric.19G049100.1 OVA5, ATKRS-2,... lysine-tRNA ligase & original description:... 0.02 OrthoFinder output from all 47 species
Cre06.g296250 OVA5, ATKRS-2 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder output from all 47 species
Dcu_g11670 OVA5, ATKRS-2 lysine-tRNA ligase & original description: none 0.01 OrthoFinder output from all 47 species
Gb_05325 OVA5, ATKRS-2 lysine-tRNA ligase 0.01 OrthoFinder output from all 47 species
LOC_Os02g41470.3 OVA5, ATKRS-2,... lysine-tRNA ligase 0.01 OrthoFinder output from all 47 species
Mp7g09810.1 OVA5, ATKRS-2 lysine-tRNA ligase 0.02 OrthoFinder output from all 47 species
Nbi_g08031 OVA5, ATKRS-2 lysine-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03084 OVA5, ATKRS-2 lysine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15740 No alias lysine-tRNA ligase & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g30430 OVA5, ATKRS-2 lysine-tRNA ligase & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e006285_P003 OVA5, ATKRS-2,... lysine-tRNA ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR004365 NA-bd_OB_tRNA 2 85
No external refs found!