Cpa|evm.model.tig00001154.8 (HEMB1)

Aliases : HEMB1

Description : Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen synthase

Gene families : OG0006175 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006175_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00001154.8

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00259220	HEMB1,...	Coenzyme metabolism.tetrapyrrol...	0.05	OrthoFinder output from all 47 species
AT1G69740	HEMB1	Aldolase superfamily protein	0.02	OrthoFinder output from all 47 species
Aev_g07164	HEMB1	EC_4.2 carbon-oxygen lyase & original description: none	0.01	OrthoFinder output from all 47 species
Ala_g01649	HEMB1	EC_4.2 carbon-oxygen lyase & original description: none	0.01	OrthoFinder output from all 47 species
Aob_g06542	HEMB1	EC_4.2 carbon-oxygen lyase & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g09956	HEMB1	EC_4.2 carbon-oxygen lyase & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene27653.t1	HEMB1, Aspi01Gene27653	EC_4.2 carbon-oxygen lyase & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0077.g037965	HEMB1	EC_4.2 carbon-oxygen lyase & original description: CDS=83-1387	0.04	OrthoFinder output from all 47 species
Ceric.20G017900.1	HEMB1, Ceric.20G017900	EC_4.2 carbon-oxygen lyase & original description:...	0.01	OrthoFinder output from all 47 species
Cre02.g091050	HEMB1	Coenzyme metabolism.tetrapyrrol...	0.09	OrthoFinder output from all 47 species
GSVIVT01008851001	HEMB1	Coenzyme metabolism.tetrapyrrol...	0.11	OrthoFinder output from all 47 species
LOC_Os06g49110.3	HEMB1, LOC_Os06g49110	porphobilinogen synthase	0.01	OrthoFinder output from all 47 species
Lfl_g07323	HEMB1	EC_4.2 carbon-oxygen lyase & original description: none	0.01	OrthoFinder output from all 47 species
Mp1g22820.1	HEMB1	porphobilinogen synthase	0.06	OrthoFinder output from all 47 species
Msp_g29344	HEMB1	EC_4.2 carbon-oxygen lyase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g05454	HEMB1	EC_4.2 carbon-oxygen lyase & original description: none	0.05	OrthoFinder output from all 47 species
Pir_g04541	HEMB1	EC_4.2 carbon-oxygen lyase & original description: none	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000572	HEMB1	EC_4.2 carbon-oxygen lyase & original description: CDS=52-1308	0.03	OrthoFinder output from all 47 species
Smo441909	HEMB1	Coenzyme metabolism.tetrapyrrol...	0.03	OrthoFinder output from all 47 species
Solyc08g069030.4.1	HEMB1, Solyc08g069030	porphobilinogen synthase	0.03	OrthoFinder output from all 47 species
Spa_g24428	HEMB1	EC_4.2 carbon-oxygen lyase & original description: none	0.01	OrthoFinder output from all 47 species
Spa_g39145	HEMB1	EC_4.2 carbon-oxygen lyase & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e013205_P001	HEMB1, Zm00001e013205	porphobilinogen synthase	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004655	porphobilinogen synthase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016835	carbon-oxygen lyase activity	None	Extended
MF	GO:0016836	hydro-lyase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0033013	tetrapyrrole metabolic process	None	Extended
BP	GO:0033014	tetrapyrrole biosynthetic process	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0004418	hydroxymethylbilane synthase activity	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
MF	GO:0004853	uroporphyrinogen decarboxylase activity	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	HCCA
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	HCCA
MF	GO:0008483	transaminase activity	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
BP	GO:0017006	protein-tetrapyrrole linkage	IEP	HCCA
BP	GO:0017007	protein-bilin linkage	IEP	HCCA
BP	GO:0017009	protein-phycocyanobilin linkage	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
BP	GO:0042254	ribosome biogenesis	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001731	ALAD	90	314
IPR001731	ALAD	315	371

External Links

No external refs found!

Cpa|evm.model.tig00001154.8 (HEMB1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation