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  5. Cpa|evm.model.tig00001095.9

Cpa|evm.model.tig00001095.9 (CRTISO, CCR2)


Aliases : CRTISO, CCR2

Description : Prolycopene isomerase, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0006448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006448_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001095.9
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00154100 CRTISO, CCR2,... Secondary metabolism.terpenoids.terpenoid... 0.02 OrthoFinder output from all 47 species
AT1G06820 CRTISO, CCR2 carotenoid isomerase 0.04 OrthoFinder output from all 47 species
Ala_g13435 CRTISO, CCR2 carotenoid isomerase *(CrtISO) & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0231.g059233 CRTISO, CCR2 carotenoid isomerase *(CrtISO) & original description: CDS=1-1908 0.02 OrthoFinder output from all 47 species
Ceric.27G002800.1 CRTISO, CCR2,... carotenoid isomerase *(CrtISO) & original description:... 0.01 OrthoFinder output from all 47 species
Cre16.g651923 CRTISO, CCR2 Secondary metabolism.terpenoids.terpenoid... 0.01 OrthoFinder output from all 47 species
GSVIVT01022527001 CRTISO, CCR2 Secondary metabolism.terpenoids.terpenoid... 0.01 OrthoFinder output from all 47 species
LOC_Os11g36440.1 CRTISO, CCR2,... carotenoid isomerase (CrtISO) 0.02 OrthoFinder output from all 47 species
MA_10436461g0010 CRTISO, CCR2 carotenoid isomerase (CrtISO) 0.02 OrthoFinder output from all 47 species
Mp5g24430.1 CRTISO, CCR2 carotenoid isomerase (CrtISO) 0.01 OrthoFinder output from all 47 species
Ppi_g16052 CRTISO, CCR2 carotenoid isomerase *(CrtISO) & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e024419_P002 CRTISO, CCR2,... carotenoid isomerase (CrtISO) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003953 FAD-binding_2 82 111
No external refs found!