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  5. Cpa|evm.model.tig00000158.22

Cpa|evm.model.tig00000158.22 (DOC1, ASA1, UMB1,...)


Aliases : DOC1, ASA1, UMB1, LPR1, TIR3, CRM1, BIG

Description : Auxin transport protein BIG OS=Arabidopsis thaliana


Gene families : OG0002424 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002424_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000158.22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00248360 DOC1, ASA1,... Phytohormones.auxin.transport.polar auxin transport.BIG... 0.02 OrthoFinder output from all 47 species
AT3G02260 DOC1, ASA1,... auxin transport protein (BIG) 0.03 OrthoFinder output from all 47 species
Aev_g27442 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.02 OrthoFinder output from all 47 species
Ala_g11928 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene46863.t1 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0061.g035098 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.02 OrthoFinder output from all 47 species
Ceric.14G095600.1 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.03 OrthoFinder output from all 47 species
Dcu_g43763 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01036538001 DOC1, ASA1,... Phytohormones.auxin.transport.polar auxin transport.BIG... 0.02 OrthoFinder output from all 47 species
Gb_03145 DOC1, ASA1,... BIG auxin transport regulator protein 0.02 OrthoFinder output from all 47 species
LOC_Os09g07294.1 DOC1, ASA1,... BIG auxin transport regulator protein 0.01 OrthoFinder output from all 47 species
LOC_Os09g07300.1 DOC1, ASA1,... BIG auxin transport regulator protein 0.04 OrthoFinder output from all 47 species
Lfl_g12340 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.03 OrthoFinder output from all 47 species
MA_10425891g0010 DOC1, ASA1,... BIG auxin transport regulator protein 0.02 OrthoFinder output from all 47 species
MA_10436857g0010 DOC1, ASA1,... Auxin transport protein BIG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10437010g0030 DOC1, ASA1,... Auxin transport protein BIG OS=Oryza sativa subsp.... 0.01 OrthoFinder output from all 47 species
MA_141071g0010 DOC1, ASA1,... Auxin transport protein BIG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_18467g0010 DOC1, ASA1,... Auxin transport protein BIG OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
MA_92502g0010 ATROP4, ROP4,... Rac-like GTP-binding protein 7 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
MA_9930317g0010 DOC1, ASA1,... Auxin transport protein BIG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g24012 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.02 OrthoFinder output from all 47 species
Ore_g38131 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005167 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.03 OrthoFinder output from all 47 species
Sam_g27860 No alias regulatory protein *(BIG) of auxin transport & original... 0.03 OrthoFinder output from all 47 species
Smo141341 DOC1, ASA1,... Phytohormones.auxin.transport.polar auxin transport.BIG... 0.02 OrthoFinder output from all 47 species
Solyc02g089260.4.1 DOC1, ASA1,... BIG auxin transport regulator protein 0.01 OrthoFinder output from all 47 species
Zm00001e033628_P002 DOC1, ASA1,... BIG auxin transport regulator protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003126 Znf_UBR 1207 1263
No external refs found!