Cpa|evm.model.tig00000144.56

Description : Elongation factor G-1, mitochondrial OS=Arabidopsis thaliana

Gene families : OG0002078 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002078_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00000144.56

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00246330	evm_27.TU.AmTr_v1...	Protein biosynthesis.organelle translation...	0.03	OrthoFinder output from all 47 species
AMTR_s00149p00031690	ATSCO1/CPEF-G,...	Protein biosynthesis.organelle translation...	0.01	OrthoFinder output from all 47 species
AT1G45332	No alias	Translation elongation factor EFG/EF2 protein	0.02	OrthoFinder output from all 47 species
AT1G62750	ATSCO1/CPEF-G,...	Translation elongation factor EFG/EF2 protein	0.01	OrthoFinder output from all 47 species
Adi_g087916	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.01	OrthoFinder output from all 47 species
Adi_g109949	No alias	translation elongation factor *(EF-G) & original...	0.01	OrthoFinder output from all 47 species
Ala_g02449	No alias	translation elongation factor *(EF-G) & original...	0.01	OrthoFinder output from all 47 species
Aop_g14154	No alias	translation elongation factor *(EF-G) & original...	0.01	OrthoFinder output from all 47 species
Azfi_s0027.g023510	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.01	OrthoFinder output from all 47 species
Ceric.04G106300.1	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.01	OrthoFinder output from all 47 species
Ceric.39G011600.1	Ceric.39G011600	translation elongation factor *(EF-G) & original...	0.03	OrthoFinder output from all 47 species
Cre11.g467553	No alias	Elongation factor G, mitochondrial OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
Dcu_g08930	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.01	OrthoFinder output from all 47 species
GSVIVT01006035001	ATSCO1/CPEF-G,...	Protein biosynthesis.organelle translation...	0.02	OrthoFinder output from all 47 species
GSVIVT01018186001	No alias	Protein biosynthesis.organelle translation...	0.01	OrthoFinder output from all 47 species
Gb_36066	ATSCO1/CPEF-G,...	EF-G translation elongation factor	0.01	OrthoFinder output from all 47 species
LOC_Os03g36780.1	LOC_Os03g36780	EF-G translation elongation factor	0.01	OrthoFinder output from all 47 species
Len_g12465	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.02	OrthoFinder output from all 47 species
Ore_g06853	No alias	translation elongation factor *(EF-G) & original...	0.01	OrthoFinder output from all 47 species
Pnu_g07398	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.01	OrthoFinder output from all 47 species
Ppi_g15053	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.01	OrthoFinder output from all 47 species
Spa_g50183	No alias	translation elongation factor *(EF-G) & original...	0.01	OrthoFinder output from all 47 species
Tin_g01189	ATSCO1/CPEF-G,...	translation elongation factor *(EF-G) & original...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000795	T_Tr_GTP-bd_dom	34	209

External Links

No external refs found!

Cpa|evm.model.tig00000144.56

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation