1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. ATCG01250

ATCG01250 (NDHB.2)


Aliases : NDHB.2

Description : NADH-Ubiquinone/plastoquinone (complex I) protein


Gene families : OG0002858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002858_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ATCG01250
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272610 evm_27.TU.AmTr_v1... NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00102p00105080 evm_27.TU.AmTr_v1... NAD(P)H-quinone oxidoreductase subunit 2 A,... 0.09 OrthoFinder output from all 47 species
AMTR_s00543p00012290 evm_27.TU.AmTr_v1... NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.13 OrthoFinder output from all 47 species
AT2G07689 No alias NADH-Ubiquinone/plastoquinone (complex I) protein 0.04 OrthoFinder output from all 47 species
Aev_g13772 NDHB.1 component *(NdhB) of NDH membrane subcomplex M &... 0.46 OrthoFinder output from all 47 species
Ala_g08110 NDHB.1 component *(NdhB) of NDH membrane subcomplex M &... 0.09 OrthoFinder output from all 47 species
Als_g09956 NDHB.1 component *(NdhB) of NDH membrane subcomplex M &... 0.1 OrthoFinder output from all 47 species
Als_g16648 NAD2B, NAD2.2, NAD2 component *(ND2/NQO14) of NADH dehydrogenase proton... 0.06 OrthoFinder output from all 47 species
Aob_g05863 NDHB.1 not classified & original description: none 0.19 OrthoFinder output from all 47 species
Cba_g16276 NAD2B, NAD2.2, NAD2 component *(ND2/NQO14) of NADH dehydrogenase proton... 0.11 OrthoFinder output from all 47 species
Ceric.01G057300.1 NDHB.1, Ceric.01G057300 component *(NdhB) of NDH membrane subcomplex M &... 0.24 OrthoFinder output from all 47 species
Ceric.05G040600.1 NDHB.1, Ceric.05G040600 not classified & original description: pacid=50579146... 0.14 OrthoFinder output from all 47 species
Ceric.07G060700.1 NDHB.1, Ceric.07G060700 not classified & original description: pacid=50627539... 0.03 OrthoFinder output from all 47 species
Ceric.26G042200.1 NDHB.1, Ceric.26G042200 component *(NdhB) of NDH membrane subcomplex M &... 0.23 OrthoFinder output from all 47 species
Ceric.28G022400.1 NDHB.1, Ceric.28G022400 not classified & original description: pacid=50570102... 0.08 OrthoFinder output from all 47 species
Ceric.29G005900.1 NDHB.1, Ceric.29G005900 not classified & original description: pacid=50624802... 0.25 OrthoFinder output from all 47 species
Ceric.29G006000.1 NDHB.1, Ceric.29G006000 not classified & original description: pacid=50625919... 0.21 OrthoFinder output from all 47 species
Dcu_g42753 NDHB.1 component *(NdhB) of NDH membrane subcomplex M &... 0.06 OrthoFinder output from all 47 species
GSVIVT01007203001 NAD2B, NAD2.2, NAD2 NADH-ubiquinone oxidoreductase chain 2 OS=Beta vulgaris 0.08 OrthoFinder output from all 47 species
Gb_02794 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_06313 No alias NADH-ubiquinone oxidoreductase chain 2 OS=Marchantia... 0.05 OrthoFinder output from all 47 species
Gb_11367 NDHB.1 NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.03 OrthoFinder output from all 47 species
Gb_12705 No alias NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_17281 NDHB.1 NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.17 OrthoFinder output from all 47 species
Gb_18608 No alias NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.16 OrthoFinder output from all 47 species
Gb_26088 No alias NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Gb_26291 NDHB.1 component NdhB of NDH membrane subcomplex M 0.15 OrthoFinder output from all 47 species
Gb_26773 No alias NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_35878 No alias NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_40560 NDHB.1 NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.03 OrthoFinder output from all 47 species
LOC_Os04g16854.1 NDHB.1, LOC_Os04g16854 component NdhB of NDH membrane subcomplex M 0.03 OrthoFinder output from all 47 species
LOC_Os07g25004.1 NDHB.1, LOC_Os07g25004 component NdhB of NDH membrane subcomplex M 0.53 OrthoFinder output from all 47 species
LOC_Os08g15248.1 NDHB.1, LOC_Os08g15248 component NdhB of NDH membrane subcomplex M 0.53 OrthoFinder output from all 47 species
Lfl_g33043 NDHB.1 not classified & original description: none 0.26 OrthoFinder output from all 47 species
Lfl_g33049 NDHB.1 not classified & original description: none 0.2 OrthoFinder output from all 47 species
MA_9734021g0010 No alias NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Nbi_g25321 NDHB.1 component *(NdhB) of NDH membrane subcomplex M &... 0.03 OrthoFinder output from all 47 species
Nbi_g25819 NAD2B, NAD2.2, NAD2 component *(ND2/NQO14) of NADH dehydrogenase proton... 0.12 OrthoFinder output from all 47 species
Ore_g01088 NDHB.1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g56892 NDHB.1 component *(NdhB) of NDH membrane subcomplex M &... 0.15 OrthoFinder output from all 47 species
Sam_g15901 No alias component *(ND2/NQO14) of NADH dehydrogenase proton... 0.08 OrthoFinder output from all 47 species
Smo137726 NDHB.1 Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.18 OrthoFinder output from all 47 species
Smo138433 No alias NADH-ubiquinone oxidoreductase chain 2 OS=Marchantia polymorpha 0.03 OrthoFinder output from all 47 species
Solyc00g125990.1.1 Solyc00g125990 NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc00g500146.1.1 NDHB.1, Solyc00g500146 NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.32 OrthoFinder output from all 47 species
Solyc00g500299.1.1 NDHB.1, Solyc00g500299 NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.03 OrthoFinder output from all 47 species
Solyc00g500314.1.1 Solyc00g500314 NADH-ubiquinone oxidoreductase chain 2 OS=Beta vulgaris... 0.08 OrthoFinder output from all 47 species
Solyc01g017170.1.1 NDHB.1, Solyc01g017170 NAD(P)H-quinone oxidoreductase subunit 2 A,... 0.05 OrthoFinder output from all 47 species
Solyc01g017260.1.1 NDHB.1, Solyc01g017260 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic... 0.01 OrthoFinder output from all 47 species
Solyc03g063500.1.1 Solyc03g063500 NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Solyc03g122010.1.1 NDHB.1, Solyc03g122010 NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.39 OrthoFinder output from all 47 species
Solyc09g015260.1.1 NDHB.1, Solyc09g015260 NAD(P)H-quinone oxidoreductase subunit 2 A,... 0.01 OrthoFinder output from all 47 species
Solyc09g050069.1.1 NDHB.1, Solyc09g050069 NAD(P)H-quinone oxidoreductase subunit 2 A,... 0.38 OrthoFinder output from all 47 species
Solyc09g050070.1.1 NDHB.1, Solyc09g050070 NAD(P)H-quinone oxidoreductase subunit 2 A,... 0.33 OrthoFinder output from all 47 species
Solyc10g061887.1.1 NDHB.1, Solyc10g061887 component NdhB of NDH membrane subcomplex M 0.37 OrthoFinder output from all 47 species
Solyc11g021090.3.1 NDHB.1, Solyc11g021090 NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.36 OrthoFinder output from all 47 species
Solyc11g021110.3.1 NDHB.1, Solyc11g021110 NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.1 OrthoFinder output from all 47 species
Solyc12g033020.1.1 NDHB.1, Solyc12g033020 NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.21 OrthoFinder output from all 47 species
Zm00001e036157_P001 Zm00001e036157 NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e037213_P001 Zm00001e037213 NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e042205_P001 Zm00001e042205 NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e042250_P001 Zm00001e042250 NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e042315_P001 Zm00001e042315 NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000311 plastid large ribosomal subunit IEP HCCA
CC GO:0000315 organellar large ribosomal subunit IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003959 NADPH dehydrogenase activity IEP HCCA
MF GO:0003964 RNA-directed DNA polymerase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006175 dATP biosynthetic process IEP HCCA
BP GO:0006176 dATP biosynthetic process from ADP IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006733 obsolete oxidoreduction coenzyme metabolic process IEP HCCA
BP GO:0006743 ubiquinone metabolic process IEP HCCA
BP GO:0006744 ubiquinone biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009106 lipoate metabolic process IEP HCCA
BP GO:0009108 obsolete coenzyme biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009151 purine deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009153 purine deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009200 deoxyribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009202 deoxyribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009215 purine deoxyribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009216 purine deoxyribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009265 2'-deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009394 2'-deoxyribonucleotide metabolic process IEP HCCA
CC GO:0009512 cytochrome b6f complex IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009526 plastid envelope IEP HCCA
CC GO:0009532 plastid stroma IEP HCCA
CC GO:0009533 chloroplast stromal thylakoid IEP HCCA
CC GO:0009534 chloroplast thylakoid IEP HCCA
CC GO:0009535 chloroplast thylakoid membrane IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009539 photosystem II reaction center IEP HCCA
CC GO:0009544 chloroplast ATP synthase complex IEP HCCA
CC GO:0009570 chloroplast stroma IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009765 photosynthesis, light harvesting IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009768 photosynthesis, light harvesting in photosystem I IEP HCCA
BP GO:0009769 photosynthesis, light harvesting in photosystem II IEP HCCA
BP GO:0009772 photosynthetic electron transport in photosystem II IEP HCCA
BP GO:0009773 photosynthetic electron transport in photosystem I IEP HCCA
CC GO:0009941 chloroplast envelope IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
CC GO:0010287 plastoglobule IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
CC GO:0016469 proton-transporting two-sector ATPase complex IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP HCCA
BP GO:0017014 protein nitrosylation IEP HCCA
BP GO:0018119 peptidyl-cysteine S-nitrosylation IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0018198 peptidyl-cysteine modification IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0019692 deoxyribose phosphate metabolic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
CC GO:0030095 chloroplast photosystem II IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0031975 envelope IEP HCCA
CC GO:0031976 plastid thylakoid IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0042170 plastid membrane IEP HCCA
BP GO:0042181 ketone biosynthetic process IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0042776 proton motive force-driven mitochondrial ATP synthesis IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0045158 electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity IEP HCCA
CC GO:0045259 proton-transporting ATP synthase complex IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
BP GO:0046060 dATP metabolic process IEP HCCA
BP GO:0046385 deoxyribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0048564 photosystem I assembly IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
CC GO:0055035 plastid thylakoid membrane IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098807 chloroplast thylakoid membrane protein complex IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901661 quinone metabolic process IEP HCCA
BP GO:1901663 quinone biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001750 ND/Mrp_mem 23 320
No external refs found!