ATCG01100 (NDHA)

Aliases : NDHA

Description : NADH dehydrogenase family protein

Gene families : OG0002562 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002562_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: ATCG01100
Cluster	HCCA: Cluster_74

Target	Alias	Description	ECC score	Gene Family Method
Aev_g43123	NDHA	component *(NdhA) of NDH membrane subcomplex M &...	0.41	OrthoFinder output from all 47 species
Ala_g00418	NDHA	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g39522	NAD1, NAD1A, ND1	component *(ND1/NQO8) of NADH dehydrogenase proton...	0.09	OrthoFinder output from all 47 species
Als_g18431	NDHA	component *(NdhA) of NDH membrane subcomplex M &...	0.02	OrthoFinder output from all 47 species
Als_g54018	NDHA	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g36066	NDHA	component *(ND1/NQO8) of NADH dehydrogenase proton...	0.09	OrthoFinder output from all 47 species
Azfi_s0724.g083812	NDHA	not classified & original description: CDS=1-351	0.08	OrthoFinder output from all 47 species
Cba_g37077	NDHA	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Cba_g74468	NDHA	component *(NdhA) of NDH membrane subcomplex M &...	0.05	OrthoFinder output from all 47 species
Ceric.01G043900.1	NDHA, Ceric.01G043900	not classified & original description: pacid=50592332...	0.03	OrthoFinder output from all 47 species
Ceric.02G090700.1	Ceric.02G090700	not classified & original description: pacid=50586236...	0.15	OrthoFinder output from all 47 species
Ceric.02G090800.1	Ceric.02G090800	not classified & original description: pacid=50586151...	0.25	OrthoFinder output from all 47 species
Ceric.04G025400.1	NDHA, Ceric.04G025400	not classified & original description: pacid=50631825...	0.02	OrthoFinder output from all 47 species
Ceric.09G082400.1	NDHA, Ceric.09G082400	not classified & original description: pacid=50586766...	0.11	OrthoFinder output from all 47 species
Ceric.18G055000.1	NDHA, Ceric.18G055000	component *(NdhA) of NDH membrane subcomplex M &...	0.07	OrthoFinder output from all 47 species
Ceric.19G010100.1	NDHA, Ceric.19G010100	not classified & original description: pacid=50575878...	0.15	OrthoFinder output from all 47 species
Ceric.1Z020500.1	NDHA, Ceric.1Z020500	not classified & original description: pacid=50586361...	0.05	OrthoFinder output from all 47 species
Ceric.23G031900.1	NDHA, Ceric.23G031900	not classified & original description: pacid=50610252...	0.12	OrthoFinder output from all 47 species
Ceric.35G068100.1	NDHA, Ceric.35G068100	not classified & original description: pacid=50581258...	0.35	OrthoFinder output from all 47 species
Dde_g00222	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g43454	NDHA	component *(NdhA) of NDH membrane subcomplex M &...	0.08	OrthoFinder output from all 47 species
GSVIVT01006663001	No alias	NADH-ubiquinone oxidoreductase chain 1 OS=Petunia hybrida	0.1	OrthoFinder output from all 47 species
Gb_28455	NDHA	component NdhE of NDH membrane subcomplex M	0.16	OrthoFinder output from all 47 species
Gb_30394	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Gb_34382	MATR	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
Gb_34383	NAD4	no hits & (original description: none)	0.08	OrthoFinder output from all 47 species
Gb_35175	No alias	no hits & (original description: none)	0.07	OrthoFinder output from all 47 species
LOC_Os10g21396.1	NDHA, LOC_Os10g21396	component NdhA of NDH membrane subcomplex M	0.22	OrthoFinder output from all 47 species
Len_g05183	NDHA	component *(ND1/NQO8) of NADH dehydrogenase proton...	0.04	OrthoFinder output from all 47 species
Lfl_g11988	NDHA	not classified & original description: none	0.15	OrthoFinder output from all 47 species
Mp6g05330.1	NDHA	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic...	0.01	OrthoFinder output from all 47 species
Nbi_g17907	NDHA	not classified & original description: none	0.12	OrthoFinder output from all 47 species
Ore_g01966	NDHA	not classified & original description: none	0.22	OrthoFinder output from all 47 species
Pp3c11_850V3.1	NAD1, NAD1A,...	NADH dehydrogenase 1A	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004411	No alias	not classified & original description: CDS=1-381	0.09	OrthoFinder output from all 47 species
Sam_g00616	No alias	component *(NdhA) of NDH membrane subcomplex M &...	0.08	OrthoFinder output from all 47 species
Sam_g05123	No alias	component *(ND1/NQO8) of NADH dehydrogenase proton...	0.1	OrthoFinder output from all 47 species
Solyc00g094530.1.1	Solyc00g094530	NADH-ubiquinone oxidoreductase chain 1 OS=Petunia...	0.06	OrthoFinder output from all 47 species
Solyc00g118690.1.1	NDHA, Solyc00g118690	NADH-ubiquinone oxidoreductase chain 1 OS=Citrullus...	0.06	OrthoFinder output from all 47 species
Solyc00g500041.1.1	NDHA, Solyc00g500041	component NdhA of NDH membrane subcomplex M	0.34	OrthoFinder output from all 47 species
Solyc00g500086.1.1	NDHA, Solyc00g500086	component NdhA of NDH membrane subcomplex M	0.33	OrthoFinder output from all 47 species
Solyc00g500123.1.1	NDHA, Solyc00g500123	component NdhA of NDH membrane subcomplex M	0.33	OrthoFinder output from all 47 species
Solyc00g500193.1.1	NDHA, Solyc00g500193	component NdhA of NDH membrane subcomplex M	0.31	OrthoFinder output from all 47 species
Solyc05g023920.1.1	Solyc05g023920	NADH-ubiquinone oxidoreductase chain 1 OS=Petunia...	0.01	OrthoFinder output from all 47 species
Solyc10g018950.1.1	Solyc10g018950	NADH-ubiquinone oxidoreductase chain 1 OS=Petunia...	0.04	OrthoFinder output from all 47 species
Solyc11g021230.1.1	NDHA, Solyc11g021230	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic...	0.06	OrthoFinder output from all 47 species
Spa_g01951	NDHA	component *(NdhA) of NDH membrane subcomplex M &...	0.07	OrthoFinder output from all 47 species
Spa_g17768	NDHA	component *(ND1/NQO8) of NADH dehydrogenase proton...	0.08	OrthoFinder output from all 47 species
Tin_g45988	NDHA	not classified & original description: none	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	RCA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006354	DNA-templated transcription elongation	RCA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009507	chloroplast	NAS	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	None	Extended
BP	GO:0009767	photosynthetic electron transport chain	None	Extended
BP	GO:0009773	photosynthetic electron transport in photosystem I	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010207	photosystem II assembly	RCA	Interproscan
BP	GO:0015979	photosynthesis	RCA	Interproscan
BP	GO:0015979	photosynthesis	TAS	Interproscan
BP	GO:0015980	energy derivation by oxidation of organic compounds	None	Extended
CC	GO:0016020	membrane	IDA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	NAS	Interproscan
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019684	photosynthesis, light reaction	RCA	Interproscan
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0022900	electron transport chain	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0042742	defense response to bacterium	RCA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045333	cellular respiration	RCA	Interproscan
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000311	plastid large ribosomal subunit	IEP	HCCA
CC	GO:0000315	organellar large ribosomal subunit	IEP	HCCA
MF	GO:0003954	NADH dehydrogenase activity	IEP	HCCA
MF	GO:0003959	NADPH dehydrogenase activity	IEP	HCCA
MF	GO:0003964	RNA-directed DNA polymerase activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005261	monoatomic cation channel activity	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006175	dATP biosynthetic process	IEP	HCCA
BP	GO:0006176	dATP biosynthetic process from ADP	IEP	HCCA
BP	GO:0006733	obsolete oxidoreduction coenzyme metabolic process	IEP	HCCA
BP	GO:0006743	ubiquinone metabolic process	IEP	HCCA
BP	GO:0006744	ubiquinone biosynthetic process	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006754	ATP biosynthetic process	IEP	HCCA
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
BP	GO:0009106	lipoate metabolic process	IEP	HCCA
BP	GO:0009108	obsolete coenzyme biosynthetic process	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009151	purine deoxyribonucleotide metabolic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009153	purine deoxyribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009200	deoxyribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009202	deoxyribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009215	purine deoxyribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009216	purine deoxyribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009262	deoxyribonucleotide metabolic process	IEP	HCCA
BP	GO:0009263	deoxyribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009265	2'-deoxyribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009394	2'-deoxyribonucleotide metabolic process	IEP	HCCA
CC	GO:0009512	cytochrome b6f complex	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009526	plastid envelope	IEP	HCCA
CC	GO:0009532	plastid stroma	IEP	HCCA
CC	GO:0009533	chloroplast stromal thylakoid	IEP	HCCA
CC	GO:0009534	chloroplast thylakoid	IEP	HCCA
CC	GO:0009535	chloroplast thylakoid membrane	IEP	HCCA
CC	GO:0009538	photosystem I reaction center	IEP	HCCA
CC	GO:0009539	photosystem II reaction center	IEP	HCCA
CC	GO:0009544	chloroplast ATP synthase complex	IEP	HCCA
CC	GO:0009570	chloroplast stroma	IEP	HCCA
CC	GO:0009579	thylakoid	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
MF	GO:0009678	pyrophosphate hydrolysis-driven proton transmembrane transporter activity	IEP	HCCA
BP	GO:0009765	photosynthesis, light harvesting	IEP	HCCA
BP	GO:0009768	photosynthesis, light harvesting in photosystem I	IEP	HCCA
BP	GO:0009769	photosynthesis, light harvesting in photosystem II	IEP	HCCA
BP	GO:0009772	photosynthetic electron transport in photosystem II	IEP	HCCA
CC	GO:0009941	chloroplast envelope	IEP	HCCA
CC	GO:0010287	plastoglobule	IEP	HCCA
CC	GO:0010319	stromule	IEP	HCCA
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015252	proton channel activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
BP	GO:0015977	carbon fixation	IEP	HCCA
BP	GO:0015986	proton motive force-driven ATP synthesis	IEP	HCCA
MF	GO:0016168	chlorophyll binding	IEP	HCCA
CC	GO:0016469	proton-transporting two-sector ATPase complex	IEP	HCCA
MF	GO:0016984	ribulose-bisphosphate carboxylase activity	IEP	HCCA
BP	GO:0017014	protein nitrosylation	IEP	HCCA
BP	GO:0018119	peptidyl-cysteine S-nitrosylation	IEP	HCCA
BP	GO:0018198	peptidyl-cysteine modification	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
BP	GO:0019692	deoxyribose phosphate metabolic process	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
MF	GO:0019829	ATPase-coupled monoatomic cation transmembrane transporter activity	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
CC	GO:0030095	chloroplast photosystem II	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031967	organelle envelope	IEP	HCCA
CC	GO:0031968	organelle outer membrane	IEP	HCCA
CC	GO:0031975	envelope	IEP	HCCA
CC	GO:0031976	plastid thylakoid	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
MF	GO:0034061	DNA polymerase activity	IEP	HCCA
CC	GO:0034357	photosynthetic membrane	IEP	HCCA
CC	GO:0042170	plastid membrane	IEP	HCCA
BP	GO:0042181	ketone biosynthetic process	IEP	HCCA
MF	GO:0042625	ATPase-coupled ion transmembrane transporter activity	IEP	HCCA
CC	GO:0042651	thylakoid membrane	IEP	HCCA
BP	GO:0042776	proton motive force-driven mitochondrial ATP synthesis	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
MF	GO:0044769	ATPase activity, coupled to transmembrane movement of ions, rotational mechanism	IEP	HCCA
MF	GO:0045158	electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity	IEP	HCCA
CC	GO:0045259	proton-transporting ATP synthase complex	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046060	dATP metabolic process	IEP	HCCA
BP	GO:0046385	deoxyribose phosphate biosynthetic process	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEP	HCCA
MF	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IEP	HCCA
BP	GO:0048564	photosystem I assembly	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
CC	GO:0055035	plastid thylakoid membrane	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
CC	GO:0070069	cytochrome complex	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0098807	chloroplast thylakoid membrane protein complex	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901661	quinone metabolic process	IEP	HCCA
BP	GO:1901663	quinone biosynthetic process	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1904949	ATPase complex	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001694	NADH_UbQ_OxRdtase_su1/FPO	34	352

External Links

No external refs found!

ATCG01100 (NDHA)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation