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  5. ATCG00830

ATCG00830 (RPL2.1)


Aliases : RPL2.1

Description : ribosomal protein L2


Gene families : OG0002194 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002194_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ATCG00830
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00543p00002030 RPL2.1,... 50S ribosomal protein L2, chloroplastic OS=Solanum lycopersicum 0.02 OrthoFinder output from all 47 species
Aev_g14432 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.3 OrthoFinder output from all 47 species
Aev_g24286 No alias component *(uL2m) of large mitoribosomal-subunit... 0.22 OrthoFinder output from all 47 species
Ala_g18429 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Ala_g38158 No alias component *(uL2m) of large mitoribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Als_g02244 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Als_g02447 No alias component *(uL2m) of large mitoribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Aob_g13898 RPL2.1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g61267 No alias component *(uL2m) of large mitoribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Cba_g03784 No alias component *(uL2m) of large mitoribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Cba_g04596 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Ceric.05G042700.1 RPL2.1, Ceric.05G042700 not classified & original description: pacid=50577724... 0.17 OrthoFinder output from all 47 species
Ceric.05G048500.1 RPL2.1, Ceric.05G048500 component *(uL2c) of large plastid ribosomal-subunit... 0.12 OrthoFinder output from all 47 species
Ceric.07G017400.1 RPL2.1, Ceric.07G017400 not classified & original description: pacid=50626616... 0.14 OrthoFinder output from all 47 species
Ceric.1Z020200.1 RPL2.1, Ceric.1Z020200 not classified & original description: pacid=50586367... 0.11 OrthoFinder output from all 47 species
Ceric.1Z164200.1 RPL2.1, Ceric.1Z164200 not classified & original description: pacid=50596959... 0.19 OrthoFinder output from all 47 species
Ceric.23G029300.1 Ceric.23G029300 not classified & original description: pacid=50611505... 0.06 OrthoFinder output from all 47 species
Ceric.25G023800.1 Ceric.25G023800 not classified & original description: pacid=50593099... 0.05 OrthoFinder output from all 47 species
Ceric.38G009500.1 RPL2.1, Ceric.38G009500 not classified & original description: pacid=50580350... 0.08 OrthoFinder output from all 47 species
Ceric.38G057600.1 Ceric.38G057600 not classified & original description: pacid=50579815... 0.18 OrthoFinder output from all 47 species
Cre07.g348850 RPL2.1 50S ribosomal protein L2, chloroplastic OS=Chara vulgaris 0.05 OrthoFinder output from all 47 species
Dcu_g49833 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Dde_g06655 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Dde_g21793 RPL2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01023979001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_17475 RPL2.1 50S ribosomal protein L2, chloroplastic OS=Cycas... 0.05 OrthoFinder output from all 47 species
Gb_20139 RPL2.1 component psRPS11 of small ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Gb_24024 RPL2.1 50S ribosomal protein L2, chloroplastic OS=Cycas... 0.05 OrthoFinder output from all 47 species
Gb_25047 RPL2.1 50S ribosomal protein L2, chloroplastic OS=Cycas... 0.05 OrthoFinder output from all 47 species
Gb_37512 RPL2.1 50S ribosomal protein L2, chloroplastic OS=Cycas... 0.04 OrthoFinder output from all 47 species
Lfl_g13189 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Mp1g19370.1 No alias no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Nbi_g04996 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.12 OrthoFinder output from all 47 species
Nbi_g39693 No alias component *(uL2m) of large mitoribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Ore_g43250 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.26 OrthoFinder output from all 47 species
Pir_g37334 No alias component *(uL2m) of large mitoribosomal-subunit... 0.21 OrthoFinder output from all 47 species
Pp3c2_23491V3.1 Pp3c2_23491 Ribosomal protein L2 family 0.02 OrthoFinder output from all 47 species
Sam_g03873 No alias component *(uL2m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Smo137825 RPL2.1 Protein biosynthesis.organelle translation... 0.18 OrthoFinder output from all 47 species
Solyc00g500035.1.1 RPL2.1, Solyc00g500035 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.08 OrthoFinder output from all 47 species
Solyc00g500036.1.1 RPL2.1, Solyc00g500036 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.06 OrthoFinder output from all 47 species
Solyc00g500047.1.1 RPL2.1, Solyc00g500047 50S ribosomal protein L2, chloroplastic OS=Solanum... 0.06 OrthoFinder output from all 47 species
Solyc00g500079.1.1 RPL2.1, Solyc00g500079 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.08 OrthoFinder output from all 47 species
Solyc00g500080.1.1 RPL2.1, Solyc00g500080 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.06 OrthoFinder output from all 47 species
Solyc00g500152.1.1 RPL2.1, Solyc00g500152 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.02 OrthoFinder output from all 47 species
Solyc00g500297.1.1 RPL2.1, Solyc00g500297 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.08 OrthoFinder output from all 47 species
Solyc00g500298.1.1 RPL2.1, Solyc00g500298 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.06 OrthoFinder output from all 47 species
Solyc02g150102.1.1 RPL2.1, Solyc02g150102 50S ribosomal protein L2, chloroplastic OS=Aethionema... 0.04 OrthoFinder output from all 47 species
Solyc09g050067.1.1 RPL2.1, Solyc09g050067 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.05 OrthoFinder output from all 47 species
Solyc10g012217.1.1 RPL2.1, Solyc10g012217 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.05 OrthoFinder output from all 47 species
Spa_g56424 RPL2 component *(uL2m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000311 plastid large ribosomal subunit TAS Interproscan
MF GO:0003735 structural constituent of ribosome TAS Interproscan
BP GO:0006412 translation TAS Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009570 chloroplast stroma IDA Interproscan
CC GO:0009941 chloroplast envelope IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
CC GO:0000312 plastid small ribosomal subunit IEP HCCA
CC GO:0000313 organellar ribosome IEP HCCA
CC GO:0000314 organellar small ribosomal subunit IEP HCCA
MF GO:0003951 NAD+ kinase activity IEP HCCA
CC GO:0005754 mitochondrial proton-transporting ATP synthase, catalytic core IEP HCCA
BP GO:0005983 starch catabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006175 dATP biosynthetic process IEP HCCA
BP GO:0006176 dATP biosynthetic process from ADP IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006741 NADP biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009151 purine deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009153 purine deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009200 deoxyribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009202 deoxyribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009215 purine deoxyribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009216 purine deoxyribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009251 glucan catabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009265 2'-deoxyribonucleotide biosynthetic process IEP HCCA
CC GO:0009295 nucleoid IEP HCCA
BP GO:0009394 2'-deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009409 response to cold IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009528 plastid inner membrane IEP HCCA
CC GO:0009533 chloroplast stromal thylakoid IEP HCCA
CC GO:0009534 chloroplast thylakoid IEP HCCA
CC GO:0009535 chloroplast thylakoid membrane IEP HCCA
CC GO:0009539 photosystem II reaction center IEP HCCA
CC GO:0009544 chloroplast ATP synthase complex IEP HCCA
CC GO:0009547 plastid ribosome IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009646 response to absence of light IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
CC GO:0009706 chloroplast inner membrane IEP HCCA
BP GO:0009765 photosynthesis, light harvesting IEP HCCA
BP GO:0009769 photosynthesis, light harvesting in photosystem II IEP HCCA
BP GO:0009772 photosynthetic electron transport in photosystem II IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
CC GO:0010287 plastoglobule IEP HCCA
CC GO:0010319 stromule IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
CC GO:0015935 small ribosomal subunit IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
CC GO:0016469 proton-transporting two-sector ATPase complex IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0019692 deoxyribose phosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0031976 plastid thylakoid IEP HCCA
CC GO:0031977 thylakoid lumen IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0042170 plastid membrane IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
MF GO:0042736 NADH kinase activity IEP HCCA
BP GO:0042776 proton motive force-driven mitochondrial ATP synthesis IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0044247 cellular polysaccharide catabolic process IEP HCCA
BP GO:0044275 cellular carbohydrate catabolic process IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
BP GO:0045037 protein import into chloroplast stroma IEP HCCA
MF GO:0045157 electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity IEP HCCA
CC GO:0045259 proton-transporting ATP synthase complex IEP HCCA
CC GO:0045267 proton-transporting ATP synthase, catalytic core IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046060 dATP metabolic process IEP HCCA
BP GO:0046385 deoxyribose phosphate biosynthetic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
CC GO:0055035 plastid thylakoid membrane IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098807 chloroplast thylakoid membrane protein complex IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
InterPro domains Description Start Stop
IPR022666 Rbsml_prot_L2_RNA-bd_dom 40 116
IPR022669 Ribosomal_L2_C 123 249
No external refs found!