ATCG00540 (PETA)


Aliases : PETA

Description : photosynthetic electron transfer A


Gene families : OG0007601 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007601_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ATCG00540
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00334p00011840 PETA,... Photosynthesis.photophosphorylation.cytochrome b6/f... 0.03 OrthoFinder output from all 47 species
Aev_g01305 PETA apocytochrome f component *(PetA) of cytochrome b6/f... 0.42 OrthoFinder output from all 47 species
Als_g00738 PETA apocytochrome f component *(PetA) of cytochrome b6/f... 0.15 OrthoFinder output from all 47 species
Aob_g01376 PETA apocytochrome f component *(PetA) of cytochrome b6/f... 0.17 OrthoFinder output from all 47 species
Cba_g23039 PETA apocytochrome f component *(PetA) of cytochrome b6/f... 0.03 OrthoFinder output from all 47 species
Ceric.02G014700.1 PETA, Ceric.02G014700 apocytochrome f component *(PetA) of cytochrome b6/f... 0.17 OrthoFinder output from all 47 species
Ceric.05G050200.1 PETA, Ceric.05G050200 not classified & original description: pacid=50577900... 0.43 OrthoFinder output from all 47 species
Ceric.05G050300.1 PETA, Ceric.05G050300 apocytochrome f component *(PetA) of cytochrome b6/f... 0.28 OrthoFinder output from all 47 species
Ceric.16G018100.1 PETA, Ceric.16G018100 apocytochrome f component *(PetA) of cytochrome b6/f... 0.17 OrthoFinder output from all 47 species
Ceric.16G060400.1 PETA, Ceric.16G060400 not classified & original description: pacid=50589755... 0.14 OrthoFinder output from all 47 species
Ceric.33G022700.1 PETA, Ceric.33G022700 apocytochrome f component *(PetA) of cytochrome b6/f... 0.13 OrthoFinder output from all 47 species
Ceric.38G007000.1 PETA, Ceric.38G007000 apocytochrome f component *(PetA) of cytochrome b6/f... 0.28 OrthoFinder output from all 47 species
Dcu_g21017 PETA apocytochrome f component *(PetA) of cytochrome b6/f... 0.07 OrthoFinder output from all 47 species
GSVIVT01015185001 PETA Cytochrome f OS=Vitis vinifera 0.09 OrthoFinder output from all 47 species
Gb_37933 PETA Cytochrome f OS=Cycas taitungensis (sp|a6h5j1|cyf_cycta : 137.0) 0.17 OrthoFinder output from all 47 species
Gb_41662 PETA Cytochrome f OS=Cycas taitungensis (sp|a6h5j1|cyf_cycta : 175.0) 0.17 OrthoFinder output from all 47 species
LOC_Os01g65902.1 PETA, LOC_Os01g65902 apocytochrome f component PetA of cytochrome b6/f complex 0.52 OrthoFinder output from all 47 species
LOC_Os02g24596.1 PETA, LOC_Os02g24596 apocytochrome f component PetA of cytochrome b6/f complex 0.08 OrthoFinder output from all 47 species
LOC_Os06g39738.1 PETA, LOC_Os06g39738 apocytochrome f component PetA of cytochrome b6/f complex 0.32 OrthoFinder output from all 47 species
LOC_Os08g15280.1 PETA, LOC_Os08g15280 apocytochrome f component PetA of cytochrome b6/f complex 0.07 OrthoFinder output from all 47 species
LOC_Os10g21290.1 PETA, LOC_Os10g21290 apocytochrome f component PetA of cytochrome b6/f complex 0.03 OrthoFinder output from all 47 species
Lfl_g06925 PETA apocytochrome f component *(PetA) of cytochrome b6/f... 0.21 OrthoFinder output from all 47 species
Mp1g27760.1 No alias no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Nbi_g09593 PETA apocytochrome f component *(PetA) of cytochrome b6/f... 0.18 OrthoFinder output from all 47 species
Ore_g43249 PETA apocytochrome f component *(PetA) of cytochrome b6/f... 0.19 OrthoFinder output from all 47 species
Sam_g03361 No alias apocytochrome f component *(PetA) of cytochrome b6/f... 0.14 OrthoFinder output from all 47 species
Smo236857 PETA Photosynthesis.photophosphorylation.cytochrome b6/f... 0.24 OrthoFinder output from all 47 species
Solyc00g500020.1.1 PETA, Solyc00g500020 apocytochrome f component PetA of cytochrome b6/f complex 0.43 OrthoFinder output from all 47 species
Solyc00g500067.1.1 PETA, Solyc00g500067 apocytochrome f component PetA of cytochrome b6/f complex 0.43 OrthoFinder output from all 47 species
Solyc10g045220.1.1 PETA, Solyc10g045220 apocytochrome f component PetA of cytochrome b6/f complex 0.47 OrthoFinder output from all 47 species
Zm00001e003903_P001 PETA, Zm00001e003903 apocytochrome f component PetA of cytochrome b6/f complex 0.04 OrthoFinder output from all 47 species
Zm00001e042161_P001 PETA, Zm00001e042161 apocytochrome f component PetA of cytochrome b6/f complex 0.04 OrthoFinder output from all 47 species
Zm00001e042498_P001 PETA, Zm00001e042498 Cytochrome f OS=Zea mays (sp|p46617|cyf_maize : 342.0) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006091 generation of precursor metabolites and energy RCA Interproscan
BP GO:0006354 DNA-templated transcription elongation RCA Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009512 cytochrome b6f complex TAS Interproscan
CC GO:0009534 chloroplast thylakoid IDA Interproscan
CC GO:0009535 chloroplast thylakoid membrane IDA Interproscan
CC GO:0009579 thylakoid IDA Interproscan
BP GO:0009767 photosynthetic electron transport chain TAS Interproscan
BP GO:0010207 photosystem II assembly RCA Interproscan
BP GO:0015979 photosynthesis RCA Interproscan
CC GO:0016020 membrane IDA Interproscan
BP GO:0019684 photosynthesis, light reaction RCA Interproscan
MF GO:0045158 electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity TAS Interproscan
Type GO Term Name Evidence Source
CC GO:0000311 plastid large ribosomal subunit IEP HCCA
CC GO:0000312 plastid small ribosomal subunit IEP HCCA
CC GO:0000314 organellar small ribosomal subunit IEP HCCA
CC GO:0000315 organellar large ribosomal subunit IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003959 NADPH dehydrogenase activity IEP HCCA
MF GO:0003964 RNA-directed DNA polymerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006175 dATP biosynthetic process IEP HCCA
BP GO:0006176 dATP biosynthetic process from ADP IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009151 purine deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009153 purine deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009200 deoxyribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009202 deoxyribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009215 purine deoxyribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009216 purine deoxyribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009265 2'-deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009394 2'-deoxyribonucleotide metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009526 plastid envelope IEP HCCA
CC GO:0009532 plastid stroma IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009539 photosystem II reaction center IEP HCCA
CC GO:0009544 chloroplast ATP synthase complex IEP HCCA
CC GO:0009570 chloroplast stroma IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009765 photosynthesis, light harvesting IEP HCCA
BP GO:0009768 photosynthesis, light harvesting in photosystem I IEP HCCA
BP GO:0009769 photosynthesis, light harvesting in photosystem II IEP HCCA
BP GO:0009772 photosynthetic electron transport in photosystem II IEP HCCA
BP GO:0009773 photosynthetic electron transport in photosystem I IEP HCCA
CC GO:0009941 chloroplast envelope IEP HCCA
CC GO:0010287 plastoglobule IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
CC GO:0016469 proton-transporting two-sector ATPase complex IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP HCCA
BP GO:0017014 protein nitrosylation IEP HCCA
BP GO:0018119 peptidyl-cysteine S-nitrosylation IEP HCCA
BP GO:0018198 peptidyl-cysteine modification IEP HCCA
BP GO:0019692 deoxyribose phosphate metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
CC GO:0030095 chloroplast photosystem II IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031975 envelope IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0042776 proton motive force-driven mitochondrial ATP synthesis IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
CC GO:0045259 proton-transporting ATP synthase complex IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
BP GO:0046060 dATP metabolic process IEP HCCA
BP GO:0046385 deoxyribose phosphate biosynthetic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0048564 photosystem I assembly IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098807 chloroplast thylakoid membrane protein complex IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR024094 Cyt_f_lg_dom 36 190
IPR002325 Cyt_f 202 320
No external refs found!