ATCG00340 (PSAB)


Aliases : PSAB

Description : Photosystem I, PsaA/PsaB protein


Gene families : OG0001111 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001111_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ATCG00340
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00250910 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.13 OrthoFinder output from all 47 species
AMTR_s00063p00185460 PSAA Photosystem I P700 chlorophyll a apoprotein A1... 0.14 OrthoFinder output from all 47 species
AMTR_s00076p00111250 PSAB Photosystem I P700 chlorophyll a apoprotein A2... 0.14 OrthoFinder output from all 47 species
AMTR_s00334p00015340 PSAA Photosystem I P700 chlorophyll a apoprotein A1... 0.13 OrthoFinder output from all 47 species
AMTR_s01196p00002960 PSAB Photosystem I P700 chlorophyll a apoprotein A2 OS=Morus indica 0.13 OrthoFinder output from all 47 species
Aev_g05542 PSAA apoprotein PsaA of PS-I complex & original description: none 0.45 OrthoFinder output from all 47 species
Als_g09461 PSAA apoprotein PsaA of PS-I complex & original description: none 0.07 OrthoFinder output from all 47 species
Als_g27956 PSAB not classified & original description: none 0.1 OrthoFinder output from all 47 species
Cba_g07701 PSAA apoprotein PsaA of PS-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16004 PSAB apoprotein PsaB of PS-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.02G013200.1 PSAB, Ceric.02G013200 apoprotein PsaB of PS-I complex & original description:... 0.13 OrthoFinder output from all 47 species
Ceric.02G013300.1 PSAA, Ceric.02G013300 not classified & original description: pacid=50585842... 0.34 OrthoFinder output from all 47 species
Ceric.02G015700.1 PSAB, Ceric.02G015700 not classified & original description: pacid=50585896... 0.33 OrthoFinder output from all 47 species
Ceric.04G104200.1 PSAB, Ceric.04G104200 apoprotein PsaB of PS-I complex & original description:... 0.13 OrthoFinder output from all 47 species
Ceric.09G047700.1 PSAB, Ceric.09G047700 apoprotein PsaB of PS-I complex & original description:... 0.31 OrthoFinder output from all 47 species
Ceric.09G047800.1 PSAA, Ceric.09G047800 apoprotein PsaA of PS-I complex & original description:... 0.26 OrthoFinder output from all 47 species
Ceric.1Z022700.1 PSAB, Ceric.1Z022700 not classified & original description: pacid=50586378... 0.14 OrthoFinder output from all 47 species
Ceric.23G081400.1 PSAB, Ceric.23G081400 not classified & original description: pacid=50610997... 0.12 OrthoFinder output from all 47 species
Ceric.29G032500.1 PSAB, Ceric.29G032500 not classified & original description: pacid=50624761... 0.03 OrthoFinder output from all 47 species
Ceric.29G032700.1 PSAA, Ceric.29G032700 apoprotein PsaA of PS-I complex & original description:... 0.08 OrthoFinder output from all 47 species
Ceric.31G008700.1 PSAA, Ceric.31G008700 not classified & original description: pacid=50575048... 0.14 OrthoFinder output from all 47 species
Ceric.32G035400.1 PSAB, Ceric.32G035400 not classified & original description: pacid=50597300... 0.22 OrthoFinder output from all 47 species
Ceric.32G035600.1 PSAB, Ceric.32G035600 not classified & original description: pacid=50597464... 0.09 OrthoFinder output from all 47 species
Ceric.33G023600.1 PSAA, Ceric.33G023600 not classified & original description: pacid=50606362... 0.16 OrthoFinder output from all 47 species
Ceric.38G009600.1 PSAB, Ceric.38G009600 not classified & original description: pacid=50579849... 0.27 OrthoFinder output from all 47 species
Dac_g17800 PSAA apoprotein PsaA of PS-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20890 PSAB apoprotein PsaB of PS-I complex & original description: none 0.17 OrthoFinder output from all 47 species
Dcu_g23259 PSAA apoprotein PsaA of PS-I complex & original description: none 0.15 OrthoFinder output from all 47 species
GSVIVT01009295001 PSAB Photosystem I P700 chlorophyll a apoprotein A2 OS=Vitis vinifera 0.1 OrthoFinder output from all 47 species
GSVIVT01014968001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01017483001 PSAB Photosystem I P700 chlorophyll a apoprotein A2 OS=Vitis vinifera 0.1 OrthoFinder output from all 47 species
GSVIVT01017484001 No alias Photosystem I P700 chlorophyll a apoprotein A1 OS=Populus alba 0.09 OrthoFinder output from all 47 species
GSVIVT01023733001 PSAA Photosystem I P700 chlorophyll a apoprotein A1... 0.1 OrthoFinder output from all 47 species
Gb_09026 PSAA Photosystem I P700 chlorophyll a apoprotein A1... 0.07 OrthoFinder output from all 47 species
Gb_11361 PSAA Photosystem I P700 chlorophyll a apoprotein A1... 0.17 OrthoFinder output from all 47 species
Gb_11944 PSAB Photosystem I P700 chlorophyll a apoprotein A2 OS=Cycas... 0.17 OrthoFinder output from all 47 species
Gb_20142 PSAA Photosystem I P700 chlorophyll a apoprotein A1... 0.02 OrthoFinder output from all 47 species
Gb_41658 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.03 OrthoFinder output from all 47 species
LOC_Os01g57962.1 PSAB, LOC_Os01g57962 apoprotein PsaB of PS-I complex 0.17 OrthoFinder output from all 47 species
LOC_Os01g57964.1 PSAA, LOC_Os01g57964 apoprotein PsaA of PS-I complex 0.07 OrthoFinder output from all 47 species
LOC_Os04g16760.1 PSAA, LOC_Os04g16760 apoprotein PsaA of PS-I complex 0.49 OrthoFinder output from all 47 species
LOC_Os05g01675.1 PSAA, LOC_Os05g01675 apoprotein PsaA of PS-I complex 0.49 OrthoFinder output from all 47 species
LOC_Os10g21248.1 PSAB, LOC_Os10g21248 apoprotein PsaB of PS-I complex 0.08 OrthoFinder output from all 47 species
LOC_Os10g21250.1 PSAA, LOC_Os10g21250 apoprotein PsaA of PS-I complex 0.19 OrthoFinder output from all 47 species
LOC_Os10g38229.1 PSAA, LOC_Os10g38229 apoprotein PsaA of PS-I complex 0.3 OrthoFinder output from all 47 species
LOC_Os10g38234.1 PSAB, LOC_Os10g38234 apoprotein PsaB of PS-I complex 0.44 OrthoFinder output from all 47 species
Lfl_g07434 PSAB apoprotein PsaB of PS-I complex & original description: none 0.14 OrthoFinder output from all 47 species
Lfl_g13216 PSAA apoprotein PsaA of PS-I complex & original description: none 0.14 OrthoFinder output from all 47 species
MA_103963g0010 PSAA Photosystem I P700 chlorophyll a apoprotein A1 OS=Pinus... 0.03 OrthoFinder output from all 47 species
MA_173626g0010 PSAB Photosystem I P700 chlorophyll a apoprotein A2 OS=Pinus... 0.03 OrthoFinder output from all 47 species
Mp1g07160.1 PSAB Photosystem I P700 chlorophyll a apoprotein A2... 0.1 OrthoFinder output from all 47 species
Mp1g16220.1 PSAA Photosystem I P700 chlorophyll a apoprotein A1... 0.09 OrthoFinder output from all 47 species
Mp3g20630.1 PSAA Photosystem I P700 chlorophyll a apoprotein A1... 0.09 OrthoFinder output from all 47 species
Ore_g01818 PSAA apoprotein PsaA of PS-I complex & original description: none 0.26 OrthoFinder output from all 47 species
Ore_g09869 PSAB apoprotein PsaB of PS-I complex & original description: none 0.25 OrthoFinder output from all 47 species
Pir_g04329 PSAB apoprotein PsaB of PS-I complex & original description: none 0.09 OrthoFinder output from all 47 species
Pnu_g01754 PSAA apoprotein PsaA of PS-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g09142 PSAB apoprotein PsaB of PS-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002247 PSAB not classified & original description: CDS=1-762 0.17 OrthoFinder output from all 47 species
Sacu_v1.1_s0528.g027465 PSAB component *(uS14c) of small plastid ribosomal-subunit... 0.15 OrthoFinder output from all 47 species
Sam_g01756 No alias apoprotein PsaB of PS-I complex & original description: none 0.08 OrthoFinder output from all 47 species
Sam_g14789 No alias apoprotein PsaA of PS-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Smo236842 PSAA Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.23 OrthoFinder output from all 47 species
Solyc00g500056.1.1 PSAB, Solyc00g500056 apoprotein PsaB of PS-I complex 0.36 OrthoFinder output from all 47 species
Solyc00g500057.1.1 PSAA, Solyc00g500057 apoprotein PsaA of PS-I complex 0.36 OrthoFinder output from all 47 species
Solyc00g500138.1.1 PSAB, Solyc00g500138 apoprotein PsaB of PS-I complex 0.36 OrthoFinder output from all 47 species
Solyc00g500208.1.1 PSAB, Solyc00g500208 apoprotein PsaB of PS-I complex 0.36 OrthoFinder output from all 47 species
Solyc00g500209.1.1 PSAA, Solyc00g500209 apoprotein PsaA of PS-I complex 0.36 OrthoFinder output from all 47 species
Solyc01g017300.2.1 PSAA, Solyc01g017300 Photosystem I P700 chlorophyll a apoprotein A1... 0.17 OrthoFinder output from all 47 species
Solyc02g036320.2.1 PSAB, Solyc02g036320 Photosystem I P700 chlorophyll a apoprotein A2 OS=Zea... 0.03 OrthoFinder output from all 47 species
Solyc05g020010.1.1 PSAB, Solyc05g020010 Photosystem I P700 chlorophyll a apoprotein A2... 0.01 OrthoFinder output from all 47 species
Solyc06g009940.1.1 PSAA, Solyc06g009940 Photosystem I P700 chlorophyll a apoprotein A1 OS=Morus... 0.38 OrthoFinder output from all 47 species
Solyc10g017910.3.1 PSAB, Solyc10g017910 Photosystem I P700 chlorophyll a apoprotein A2 OS=Atropa... 0.01 OrthoFinder output from all 47 species
Solyc12g033000.1.1 PSAB, Solyc12g033000 Photosystem I P700 chlorophyll a apoprotein A2... 0.02 OrthoFinder output from all 47 species
Solyc12g035580.1.1 PSAB, Solyc12g035580 Photosystem I P700 chlorophyll a apoprotein A2... 0.03 OrthoFinder output from all 47 species
Solyc12g035730.1.1 PSAB, Solyc12g035730 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g04697 PSAB apoprotein PsaB of PS-I complex & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g04715 PSAA apoprotein PsaA of PS-I complex & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03556 PSAA apoprotein PsaA of PS-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003909_P001 PSAB, Zm00001e003909 Photosystem I P700 chlorophyll a apoprotein A2... 0.1 OrthoFinder output from all 47 species
Zm00001e008601_P001 PSAA, Zm00001e008601 Photosystem I P700 chlorophyll a apoprotein A1... 0.14 OrthoFinder output from all 47 species
Zm00001e042034_P001 PSAA, Zm00001e042034 Photosystem I P700 chlorophyll a apoprotein A1... 0.13 OrthoFinder output from all 47 species
Zm00001e042055_P001 PSAA, Zm00001e042055 Photosystem I P700 chlorophyll a apoprotein A1... 0.13 OrthoFinder output from all 47 species
Zm00001e042056_P001 PSAB, Zm00001e042056 apoprotein PsaB of PS-I complex 0.12 OrthoFinder output from all 47 species
Zm00001e042075_P001 PSAB, Zm00001e042075 Photosystem I P700 chlorophyll a apoprotein A2... 0.1 OrthoFinder output from all 47 species
Zm00001e042077_P001 PSAA, Zm00001e042077 Photosystem I P700 chlorophyll a apoprotein A1... 0.13 OrthoFinder output from all 47 species
Zm00001e042099_P001 PSAA, Zm00001e042099 Photosystem I P700 chlorophyll a apoprotein A1... 0.13 OrthoFinder output from all 47 species
Zm00001e042101_P001 PSAB, Zm00001e042101 Photosystem I P700 chlorophyll a apoprotein A2... 0.1 OrthoFinder output from all 47 species
Zm00001e042150_P001 PSAA, Zm00001e042150 Photosystem I P700 chlorophyll a apoprotein A1... 0.13 OrthoFinder output from all 47 species
Zm00001e042151_P001 PSAB, Zm00001e042151 apoprotein PsaB of PS-I complex 0.12 OrthoFinder output from all 47 species
Zm00001e042235_P001 PSAB, Zm00001e042235 apoprotein PsaB of PS-I complex 0.12 OrthoFinder output from all 47 species
Zm00001e042354_P001 PSAB, Zm00001e042354 Photosystem I P700 chlorophyll a apoprotein A2... 0.09 OrthoFinder output from all 47 species
Zm00001e042404_P001 PSAB, Zm00001e042404 Photosystem I P700 chlorophyll a apoprotein A2... 0.1 OrthoFinder output from all 47 species
Zm00001e042440_P001 PSAB, Zm00001e042440 Photosystem I P700 chlorophyll a apoprotein A2... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006091 generation of precursor metabolites and energy RCA Interproscan
BP GO:0006354 DNA-templated transcription elongation RCA Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009534 chloroplast thylakoid IDA Interproscan
CC GO:0009535 chloroplast thylakoid membrane IDA Interproscan
CC GO:0009535 chloroplast thylakoid membrane TAS Interproscan
CC GO:0009538 photosystem I reaction center TAS Interproscan
CC GO:0009579 thylakoid IDA Interproscan
BP GO:0009768 photosynthesis, light harvesting in photosystem I TAS Interproscan
CC GO:0009941 chloroplast envelope IDA Interproscan
CC GO:0010287 plastoglobule IDA Interproscan
BP GO:0015979 photosynthesis RCA Interproscan
CC GO:0016020 membrane IDA Interproscan
MF GO:0016168 chlorophyll binding TAS Interproscan
BP GO:0019684 photosynthesis, light reaction RCA Interproscan
Type GO Term Name Evidence Source
CC GO:0000311 plastid large ribosomal subunit IEP HCCA
CC GO:0000315 organellar large ribosomal subunit IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003959 NADPH dehydrogenase activity IEP HCCA
MF GO:0003964 RNA-directed DNA polymerase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006175 dATP biosynthetic process IEP HCCA
BP GO:0006176 dATP biosynthetic process from ADP IEP HCCA
BP GO:0006733 obsolete oxidoreduction coenzyme metabolic process IEP HCCA
BP GO:0006743 ubiquinone metabolic process IEP HCCA
BP GO:0006744 ubiquinone biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009106 lipoate metabolic process IEP HCCA
BP GO:0009108 obsolete coenzyme biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009151 purine deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009153 purine deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009200 deoxyribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009202 deoxyribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009215 purine deoxyribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009216 purine deoxyribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009265 2'-deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009394 2'-deoxyribonucleotide metabolic process IEP HCCA
CC GO:0009512 cytochrome b6f complex IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009532 plastid stroma IEP HCCA
CC GO:0009533 chloroplast stromal thylakoid IEP HCCA
CC GO:0009539 photosystem II reaction center IEP HCCA
CC GO:0009544 chloroplast ATP synthase complex IEP HCCA
CC GO:0009570 chloroplast stroma IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009769 photosynthesis, light harvesting in photosystem II IEP HCCA
BP GO:0009772 photosynthetic electron transport in photosystem II IEP HCCA
BP GO:0009773 photosynthetic electron transport in photosystem I IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
CC GO:0016469 proton-transporting two-sector ATPase complex IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP HCCA
BP GO:0017014 protein nitrosylation IEP HCCA
BP GO:0018119 peptidyl-cysteine S-nitrosylation IEP HCCA
BP GO:0018198 peptidyl-cysteine modification IEP HCCA
BP GO:0019692 deoxyribose phosphate metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
CC GO:0030095 chloroplast photosystem II IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0042181 ketone biosynthetic process IEP HCCA
BP GO:0042776 proton motive force-driven mitochondrial ATP synthesis IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0045158 electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity IEP HCCA
CC GO:0045259 proton-transporting ATP synthase complex IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
BP GO:0046060 dATP metabolic process IEP HCCA
BP GO:0046385 deoxyribose phosphate biosynthetic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0048564 photosystem I assembly IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098807 chloroplast thylakoid membrane protein complex IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901661 quinone metabolic process IEP HCCA
BP GO:1901663 quinone biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001280 PSI_PsaA/B 8 727
No external refs found!