ATCG00130 (ATPF)

Aliases : ATPF

Description : ATPase, F0 complex, subunit B/B', bacterial/chloroplast

Gene families : OG0008773 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008773_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: ATCG00130
Cluster	HCCA: Cluster_74

Target	Alias	Description	ECC score	Gene Family Method
Aev_g16148	ATPF	subunit b of membrane CF0 subcomplex of ATP synthase...	0.38	OrthoFinder output from all 47 species
Aob_g35727	ATPF	subunit b of membrane CF0 subcomplex of ATP synthase...	0.18	OrthoFinder output from all 47 species
Azfi_s0009.g011763	No alias	subunit b of membrane CF0 subcomplex of ATP synthase...	0.09	OrthoFinder output from all 47 species
Azfi_s0026.g023369	No alias	subunit b of membrane CF0 subcomplex of ATP synthase...	0.08	OrthoFinder output from all 47 species
Ceric.01G056800.1	ATPF, Ceric.01G056800	subunit b of membrane CF0 subcomplex of ATP synthase...	0.13	OrthoFinder output from all 47 species
Ceric.02G012400.1	ATPF, Ceric.02G012400	subunit b of membrane CF0 subcomplex of ATP synthase...	0.14	OrthoFinder output from all 47 species
Ceric.11G075700.1	Ceric.11G075700	subunit b of membrane CF0 subcomplex of ATP synthase...	0.16	OrthoFinder output from all 47 species
Ceric.13G052600.1	ATPF, Ceric.13G052600	subunit b of membrane CF0 subcomplex of ATP synthase...	0.07	OrthoFinder output from all 47 species
Ceric.14G033500.1	Ceric.14G033500	subunit b of membrane CF0 subcomplex of ATP synthase...	0.15	OrthoFinder output from all 47 species
Ceric.19G010600.1	ATPF, Ceric.19G010600	subunit b of membrane CF0 subcomplex of ATP synthase...	0.2	OrthoFinder output from all 47 species
Ceric.29G005200.1	ATPF, Ceric.29G005200	subunit b of membrane CF0 subcomplex of ATP synthase...	0.36	OrthoFinder output from all 47 species
Ceric.38G010500.1	Ceric.38G010500	subunit b of membrane CF0 subcomplex of ATP synthase...	0.37	OrthoFinder output from all 47 species
Dcu_g12660	ATPF	subunit b of membrane CF0 subcomplex of ATP synthase...	0.07	OrthoFinder output from all 47 species
LOC_Os04g16748.1	ATPF, LOC_Os04g16748	subunit b of membrane CF0 subcomplex of ATP synthase complex	0.43	OrthoFinder output from all 47 species
LOC_Os10g21238.1	ATPF, LOC_Os10g21238	subunit b of membrane CF0 subcomplex of ATP synthase complex	0.43	OrthoFinder output from all 47 species
LOC_Os10g38272.1	ATPF, LOC_Os10g38272	subunit b of membrane CF0 subcomplex of ATP synthase complex	0.43	OrthoFinder output from all 47 species
Msp_g04898	No alias	subunit b of membrane CF0 subcomplex of ATP synthase...	0.03	OrthoFinder output from all 47 species
Nbi_g01702	No alias	subunit b of membrane CF0 subcomplex of ATP synthase...	0.11	OrthoFinder output from all 47 species
Pir_g18656	No alias	subunit b of membrane CF0 subcomplex of ATP synthase...	0.21	OrthoFinder output from all 47 species
Pnu_g27868	No alias	subunit b of membrane CF0 subcomplex of ATP synthase...	0.08	OrthoFinder output from all 47 species
Sacu_v1.1_s2240.g028297	No alias	not classified & original description: CDS=1-537	0.13	OrthoFinder output from all 47 species
Sam_g33436	No alias	subunit b of membrane CF0 subcomplex of ATP synthase...	0.07	OrthoFinder output from all 47 species
Solyc00g500322.1.1	ATPF, Solyc00g500322	subunit b of membrane CF0 subcomplex of ATP synthase complex	0.42	OrthoFinder output from all 47 species
Solyc02g012020.3.1	ATPF, Solyc02g012020	subunit b of membrane CF0 subcomplex of ATP synthase complex	0.02	OrthoFinder output from all 47 species
Solyc10g044535.1.1	ATPF, Solyc10g044535	subunit b of membrane CF0 subcomplex of ATP synthase complex	0.38	OrthoFinder output from all 47 species
Spa_g18388	No alias	subunit b of membrane CF0 subcomplex of ATP synthase...	0.04	OrthoFinder output from all 47 species
Tin_g20608	ATPF	subunit b of membrane CF0 subcomplex of ATP synthase...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
MF	GO:0005261	monoatomic cation channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	RCA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006164	purine nucleotide biosynthetic process	None	Extended
BP	GO:0006354	DNA-templated transcription elongation	RCA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006754	ATP biosynthetic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009141	nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009142	nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009144	purine nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009152	purine ribonucleotide biosynthetic process	None	Extended
BP	GO:0009165	nucleotide biosynthetic process	None	Extended
BP	GO:0009199	ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009260	ribonucleotide biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009507	chloroplast	TAS	Interproscan
CC	GO:0009534	chloroplast thylakoid	IDA	Interproscan
CC	GO:0009535	chloroplast thylakoid membrane	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0009579	thylakoid	IDA	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009735	response to cytokinin	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015078	proton transmembrane transporter activity	None	Extended
MF	GO:0015252	proton channel activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015979	photosynthesis	RCA	Interproscan
BP	GO:0015980	energy derivation by oxidation of organic compounds	None	Extended
BP	GO:0015986	proton motive force-driven ATP synthesis	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
CC	GO:0016469	proton-transporting two-sector ATPase complex	None	Extended
MF	GO:0016874	ligase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019684	photosynthesis, light reaction	RCA	Interproscan
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
CC	GO:0019867	outer membrane	None	Extended
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031968	organelle outer membrane	None	Extended
CC	GO:0031976	plastid thylakoid	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0034357	photosynthetic membrane	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
CC	GO:0042170	plastid membrane	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0042651	thylakoid membrane	None	Extended
BP	GO:0042776	proton motive force-driven mitochondrial ATP synthesis	TAS	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
CC	GO:0045259	proton-transporting ATP synthase complex	TAS	Interproscan
BP	GO:0045333	cellular respiration	TAS	Interproscan
BP	GO:0046034	ATP metabolic process	None	Extended
BP	GO:0046390	ribose phosphate biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	TAS	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
CC	GO:0055035	plastid thylakoid membrane	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0072522	purine-containing compound biosynthetic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901293	nucleoside phosphate biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1904949	ATPase complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000311	plastid large ribosomal subunit	IEP	HCCA
CC	GO:0000312	plastid small ribosomal subunit	IEP	HCCA
CC	GO:0000314	organellar small ribosomal subunit	IEP	HCCA
CC	GO:0000315	organellar large ribosomal subunit	IEP	HCCA
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0003954	NADH dehydrogenase activity	IEP	HCCA
MF	GO:0003959	NADPH dehydrogenase activity	IEP	HCCA
MF	GO:0003964	RNA-directed DNA polymerase activity	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
BP	GO:0006175	dATP biosynthetic process	IEP	HCCA
BP	GO:0006176	dATP biosynthetic process from ADP	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
BP	GO:0009151	purine deoxyribonucleotide metabolic process	IEP	HCCA
BP	GO:0009153	purine deoxyribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009200	deoxyribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009202	deoxyribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009215	purine deoxyribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009216	purine deoxyribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009262	deoxyribonucleotide metabolic process	IEP	HCCA
BP	GO:0009263	deoxyribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009265	2'-deoxyribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009394	2'-deoxyribonucleotide metabolic process	IEP	HCCA
CC	GO:0009512	cytochrome b6f complex	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009526	plastid envelope	IEP	HCCA
CC	GO:0009532	plastid stroma	IEP	HCCA
CC	GO:0009538	photosystem I reaction center	IEP	HCCA
CC	GO:0009539	photosystem II reaction center	IEP	HCCA
CC	GO:0009544	chloroplast ATP synthase complex	IEP	HCCA
CC	GO:0009570	chloroplast stroma	IEP	HCCA
BP	GO:0009617	response to bacterium	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0009765	photosynthesis, light harvesting	IEP	HCCA
BP	GO:0009767	photosynthetic electron transport chain	IEP	HCCA
BP	GO:0009768	photosynthesis, light harvesting in photosystem I	IEP	HCCA
BP	GO:0009769	photosynthesis, light harvesting in photosystem II	IEP	HCCA
BP	GO:0009772	photosynthetic electron transport in photosystem II	IEP	HCCA
BP	GO:0009773	photosynthetic electron transport in photosystem I	IEP	HCCA
CC	GO:0009941	chloroplast envelope	IEP	HCCA
BP	GO:0010207	photosystem II assembly	IEP	HCCA
CC	GO:0010287	plastoglobule	IEP	HCCA
CC	GO:0015934	large ribosomal subunit	IEP	HCCA
BP	GO:0015977	carbon fixation	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0016168	chlorophyll binding	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	HCCA
MF	GO:0016984	ribulose-bisphosphate carboxylase activity	IEP	HCCA
BP	GO:0017014	protein nitrosylation	IEP	HCCA
BP	GO:0018119	peptidyl-cysteine S-nitrosylation	IEP	HCCA
BP	GO:0018198	peptidyl-cysteine modification	IEP	HCCA
BP	GO:0019692	deoxyribose phosphate metabolic process	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
CC	GO:0030095	chloroplast photosystem II	IEP	HCCA
CC	GO:0031967	organelle envelope	IEP	HCCA
CC	GO:0031975	envelope	IEP	HCCA
MF	GO:0034061	DNA polymerase activity	IEP	HCCA
BP	GO:0042742	defense response to bacterium	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
CC	GO:0044391	ribosomal subunit	IEP	HCCA
MF	GO:0045158	electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity	IEP	HCCA
BP	GO:0046060	dATP metabolic process	IEP	HCCA
BP	GO:0046385	deoxyribose phosphate biosynthetic process	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
BP	GO:0048564	photosystem I assembly	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
CC	GO:0070069	cytochrome complex	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
CC	GO:0098807	chloroplast thylakoid membrane protein complex	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002146	ATP_synth_b/b'su_bac/chlpt	27	156

External Links

No external refs found!

ATCG00130 (ATPF)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation