AT5G64630 (NFB01, NFB1, MUB3.9, FAS2)

Aliases : NFB01, NFB1, MUB3.9, FAS2

Description : Transducin/WD40 repeat-like superfamily protein

Gene families : OG0006619 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006619_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G64630

Target	Alias	Description	ECC score	Gene Family Method
Aop_g38719	NFB01, NFB1, MUB3.9, FAS2	component *(CAF1b/FAS2) of CAF1 histone chaperone...	0.02	OrthoFinder output from all 47 species
Ceric.12G028700.1	NFB01, NFB1,...	component *(CAF1b/FAS2) of CAF1 histone chaperone...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020629.12	NFB01, NFB1, MUB3.9, FAS2	Chromatin assembly factor 1 subunit FAS2 homolog...	0.01	OrthoFinder output from all 47 species
GSVIVT01026512001	NFB01, NFB1, MUB3.9, FAS2	Chromatin organisation.histone chaperone activities.CAF1...	0.1	OrthoFinder output from all 47 species
Lfl_g04329	NFB01, NFB1, MUB3.9, FAS2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_6422g0020	NFB01, NFB1, MUB3.9, FAS2	component CAF1b/FAS2 of CAF1 histone chaperone complex	0.02	OrthoFinder output from all 47 species
Mp4g02980.1	NFB01, NFB1, MUB3.9, FAS2	component CAF1b/FAS2 of CAF1 histone chaperone complex	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	ISS	Interproscan
BP	GO:0000724	double-strand break repair via homologous recombination	IMP	Interproscan
BP	GO:0000725	recombinational repair	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	None	Extended
BP	GO:0006302	double-strand break repair	None	Extended
BP	GO:0006310	DNA recombination	IMP	Interproscan
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006334	nucleosome assembly	IDA	Interproscan
BP	GO:0006338	chromatin remodeling	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008283	cell population proliferation	IMP	Interproscan
BP	GO:0009555	pollen development	IGI	Interproscan
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009933	meristem structural organization	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010026	trichome differentiation	IMP	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0031507	heterochromatin formation	IMP	Interproscan
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0033186	CAF-1 complex	IPI	Interproscan
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034728	nucleosome organization	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0040029	epigenetic regulation of gene expression	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0045814	negative regulation of gene expression, epigenetic	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048229	gametophyte development	None	Extended
BP	GO:0048366	leaf development	IMP	Interproscan
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048532	anatomical structure arrangement	None	Extended
BP	GO:0048827	phyllome development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065004	protein-DNA complex assembly	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070828	heterochromatin organization	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071824	protein-DNA complex subunit organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000741	karyogamy	IEP	HCCA
BP	GO:0006312	mitotic recombination	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0006997	nucleus organization	IEP	HCCA
BP	GO:0009560	embryo sac egg cell differentiation	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	HCCA
MF	GO:0019104	DNA N-glycosylase activity	IEP	HCCA
BP	GO:0022412	cellular process involved in reproduction in multicellular organism	IEP	HCCA
BP	GO:0048284	organelle fusion	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001680	WD40_repeat	10	40
IPR001680	WD40_repeat	148	181
IPR001680	WD40_repeat	57	92
IPR001680	WD40_repeat	106	140

External Links

No external refs found!

AT5G64630 (NFB01, NFB1, MUB3.9, FAS2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation