AT5G59370 (ACT4)

Aliases : ACT4

Description : actin 4

Gene families : OG0000179 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000179_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G59370

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00044p00088410	ACT11,...	Cytoskeleton.microfilament network.actin filament protein	0.04	OrthoFinder output from all 47 species
AMTR_s00062p00184900	ACT7,...	Cytoskeleton.microfilament network.actin filament protein	0.08	OrthoFinder output from all 47 species
Adi_g051263	ACT4	actin filament protein & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g060221	ACT4	actin filament protein & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g104499	ACT7	actin filament protein & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g104502	ACT7	actin filament protein & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g16802	ACT7	actin filament protein & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g18453	ACT7	actin filament protein & original description: none	0.02	OrthoFinder output from all 47 species
Als_g07236	ACT7	actin filament protein & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0006.g009647	ACT7	actin filament protein & original description: CDS=1-1191	0.05	OrthoFinder output from all 47 species
Cba_g07060	ACT7	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g10570	ACT7	actin filament protein & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g12151	ACT7	actin filament protein & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.36G029400.1	ACT7, Ceric.36G029400	actin filament protein & original description:...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021350.36	ACT11	Cytoskeleton.microfilament network.actin filament protein	0.01	OrthoFinder output from all 47 species
Cre13.g603700	ACT11	Cytoskeleton.microfilament network.actin filament protein	0.05	OrthoFinder output from all 47 species
Dcu_g10817	ACT7	actin filament protein & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g13866	ACT7	actin filament protein & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g24197	ACT7	actin filament protein & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g51293	ACT7	actin filament protein & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g19071	ACT7	actin filament protein & original description: none	0.04	OrthoFinder output from all 47 species
LOC_Os03g50885.1	ACT11, LOC_Os03g50885	actin filament protein	0.03	OrthoFinder output from all 47 species
LOC_Os03g61970.1	ACT7, LOC_Os03g61970	actin filament protein	0.04	OrthoFinder output from all 47 species
LOC_Os10g36650.1	ACT7, LOC_Os10g36650	actin filament protein	0.05	OrthoFinder output from all 47 species
LOC_Os12g44350.1	ACT11, LOC_Os12g44350	actin filament protein	0.1	OrthoFinder output from all 47 species
MA_4364416g0010	ACT12	actin filament protein	0.02	OrthoFinder output from all 47 species
Mpzg00230.1	AAc1, ACT1	actin filament protein	0.03	OrthoFinder output from all 47 species
Nbi_g06176	ACT7	actin filament protein & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g09339	ACT7	actin filament protein & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g31071	ACT7	actin filament protein & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001863	ACT7	actin filament protein & original description: CDS=1-1344	0.03	OrthoFinder output from all 47 species
Sam_g11603	No alias	actin filament protein & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g40371	No alias	actin filament protein & original description: none	0.02	OrthoFinder output from all 47 species
Smo178381	ACT7	Cytoskeleton.microfilament network.actin filament protein	0.03	OrthoFinder output from all 47 species
Solyc01g104770.4.1	ACT11, Solyc01g104770	actin filament protein	0.03	OrthoFinder output from all 47 species
Solyc05g054480.3.1	ACT11, Solyc05g054480	actin filament protein	0.07	OrthoFinder output from all 47 species
Solyc06g076090.3.1	ACT11, Solyc06g076090	actin filament protein	0.07	OrthoFinder output from all 47 species
Solyc10g086460.2.1	ACT4, Solyc10g086460	actin filament protein	0.03	OrthoFinder output from all 47 species
Solyc11g065990.2.1	ACT11, Solyc11g065990	actin filament protein	0.04	OrthoFinder output from all 47 species
Spa_g20294	ACT7	actin filament protein & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g22438	ACT7	actin filament protein & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g54123	ACT7	actin filament protein & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e005489_P002	ACT11, Zm00001e005489	actin filament protein	0.11	OrthoFinder output from all 47 species
Zm00001e009080_P001	ACT7, Zm00001e009080	actin filament protein	0.09	OrthoFinder output from all 47 species
Zm00001e012159_P001	ACT11, Zm00001e012159	actin filament protein	0.07	OrthoFinder output from all 47 species
Zm00001e027663_P005	ACT7, Zm00001e027663	actin filament protein	0.02	OrthoFinder output from all 47 species
Zm00001e028670_P001	ACT7, Zm00001e028670	actin filament protein	0.05	OrthoFinder output from all 47 species
Zm00001e029682_P001	ACT7, Zm00001e029682	actin filament protein	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005200	structural constituent of cytoskeleton	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005739	mitochondrion	IDA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005996	monosaccharide metabolic process	None	Extended
BP	GO:0006006	glucose metabolic process	None	Extended
BP	GO:0006094	gluconeogenesis	RCA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010498	proteasomal protein catabolic process	RCA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
BP	GO:0019318	hexose metabolic process	None	Extended
BP	GO:0019319	hexose biosynthetic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0030029	actin filament-based process	None	Extended
BP	GO:0030036	actin cytoskeleton organization	TAS	Interproscan
BP	GO:0030163	protein catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046364	monosaccharide biosynthetic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	IEP	HCCA
BP	GO:0000904	cell morphogenesis involved in differentiation	IEP	HCCA
BP	GO:0003006	developmental process involved in reproduction	IEP	HCCA
MF	GO:0003779	actin binding	IEP	HCCA
MF	GO:0003785	actin monomer binding	IEP	HCCA
MF	GO:0004427	inorganic diphosphate phosphatase activity	IEP	HCCA
CC	GO:0005856	cytoskeleton	IEP	HCCA
CC	GO:0005884	actin filament	IEP	HCCA
CC	GO:0009524	phragmoplast	IEP	HCCA
BP	GO:0009653	anatomical structure morphogenesis	IEP	HCCA
BP	GO:0009664	plant-type cell wall organization	IEP	HCCA
BP	GO:0009826	unidimensional cell growth	IEP	HCCA
BP	GO:0009827	plant-type cell wall modification	IEP	HCCA
BP	GO:0009860	pollen tube growth	IEP	HCCA
BP	GO:0009932	cell tip growth	IEP	HCCA
CC	GO:0015629	actin cytoskeleton	IEP	HCCA
MF	GO:0015662	P-type ion transporter activity	IEP	HCCA
BP	GO:0016049	cell growth	IEP	HCCA
BP	GO:0022414	reproductive process	IEP	HCCA
BP	GO:0030048	actin filament-based movement	IEP	HCCA
BP	GO:0032502	developmental process	IEP	HCCA
BP	GO:0040007	growth	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
BP	GO:0048588	developmental cell growth	IEP	HCCA
BP	GO:0048589	developmental growth	IEP	HCCA
BP	GO:0048868	pollen tube development	IEP	HCCA
BP	GO:0060560	developmental growth involved in morphogenesis	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	HCCA
CC	GO:0099080	supramolecular complex	IEP	HCCA
CC	GO:0099081	supramolecular polymer	IEP	HCCA
CC	GO:0099512	supramolecular fiber	IEP	HCCA
CC	GO:0099513	polymeric cytoskeletal fiber	IEP	HCCA
MF	GO:0140358	P-type transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004000	Actin	5	377

External Links

No external refs found!

AT5G59370 (ACT4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation