AT5G58140 (NPL1, PHOT2)


Aliases : NPL1, PHOT2

Description : phototropin 2


Gene families : OG0001978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001978_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G58140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00051940 NPL1, PHOT2,... External stimuli response.light.UV-A/blue... 0.04 OrthoFinder output from all 47 species
AMTR_s00023p00186390 RPT1, PHOT1,... External stimuli response.light.UV-A/blue... 0.03 OrthoFinder output from all 47 species
Adi_g058675 NPL1, PHOT2 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Ala_g06933 NPL1, PHOT2 EC_2.7 transferase transferring phosphorus-containing... 0.08 OrthoFinder output from all 47 species
Aob_g34028 NPL1, PHOT2 EC_2.7 transferase transferring phosphorus-containing... 0.05 OrthoFinder output from all 47 species
Aop_g09145 NPL1, PHOT2 EC_2.7 transferase transferring phosphorus-containing... 0.05 OrthoFinder output from all 47 species
Cba_g16281 NPL1, PHOT2 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Ceric.24G066200.1 NPL1, PHOT2,... EC_2.7 transferase transferring phosphorus-containing... 0.1 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000622.16 NPL1, PHOT2 Phototropin-2 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Dcu_g03160 NPL1, PHOT2 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Dde_g08279 NPL1, PHOT2 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Ehy_g07913 NPL1, PHOT2 EC_2.7 transferase transferring phosphorus-containing... 0.05 OrthoFinder output from all 47 species
GSVIVT01023842001 NPL1, PHOT2 External stimuli response.light.UV-A/blue... 0.08 OrthoFinder output from all 47 species
LOC_Os04g23890.2 NPL1, PHOT2,... protein kinase (AGC-VIII). phototropin light receptor.... 0.04 OrthoFinder output from all 47 species
Lfl_g09211 NPL1, PHOT2 EC_2.7 transferase transferring phosphorus-containing... 0.08 OrthoFinder output from all 47 species
Msp_g31744 NPL1, PHOT2 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Ppi_g08339 NPL1, PHOT2 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Sam_g50260 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Solyc01g097770.4.1 NPL1, PHOT2,... protein kinase (AGC-VIII). phototropin light receptor.... 0.08 OrthoFinder output from all 47 species
Zm00001e004261_P003 NPL1, PHOT2,... protein kinase (AGC-VIII). phototropin light receptor.... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000023 maltose metabolic process RCA Interproscan
MF GO:0004674 protein serine/threonine kinase activity IDA Interproscan
MF GO:0004674 protein serine/threonine kinase activity IMP Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0006364 rRNA processing RCA Interproscan
BP GO:0009637 response to blue light IGI Interproscan
BP GO:0009637 response to blue light RCA Interproscan
BP GO:0009638 phototropism IMP Interproscan
BP GO:0009638 phototropism IGI Interproscan
BP GO:0009644 response to high light intensity RCA Interproscan
BP GO:0009735 response to cytokinin IDA Interproscan
BP GO:0009744 response to sucrose RCA Interproscan
MF GO:0009882 blue light photoreceptor activity IMP Interproscan
BP GO:0009902 chloroplast relocation RCA Interproscan
BP GO:0009902 chloroplast relocation TAS Interproscan
BP GO:0010027 thylakoid membrane organization RCA Interproscan
BP GO:0010103 stomatal complex morphogenesis RCA Interproscan
BP GO:0010114 response to red light RCA Interproscan
BP GO:0010118 stomatal movement IMP Interproscan
BP GO:0010118 stomatal movement IGI Interproscan
BP GO:0010155 regulation of proton transport RCA Interproscan
MF GO:0010181 FMN binding IDA Interproscan
MF GO:0010181 FMN binding TAS Interproscan
BP GO:0010207 photosystem II assembly RCA Interproscan
BP GO:0010218 response to far red light RCA Interproscan
BP GO:0010362 negative regulation of anion channel activity by blue light IMP Interproscan
CC GO:0016020 membrane ISS Interproscan
MF GO:0016301 kinase activity ISS Interproscan
BP GO:0016556 mRNA modification RCA Interproscan
BP GO:0019252 starch biosynthetic process RCA Interproscan
BP GO:0019761 glucosinolate biosynthetic process RCA Interproscan
BP GO:0034660 ncRNA metabolic process RCA Interproscan
BP GO:0035304 regulation of protein dephosphorylation RCA Interproscan
BP GO:0042793 plastid transcription RCA Interproscan
MF GO:0042802 identical protein binding IPI Interproscan
BP GO:0043085 positive regulation of catalytic activity RCA Interproscan
BP GO:0045893 positive regulation of DNA-templated transcription RCA Interproscan
BP GO:0046777 protein autophosphorylation RCA Interproscan
BP GO:0046777 protein autophosphorylation TAS Interproscan
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005960 glycine cleavage complex IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006098 pentose-phosphate shunt IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006636 unsaturated fatty acid biosynthetic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006655 phosphatidylglycerol biosynthetic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006733 obsolete oxidoreduction coenzyme metabolic process IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006740 NADPH regeneration IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009106 lipoate metabolic process IEP HCCA
BP GO:0009108 obsolete coenzyme biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009526 plastid envelope IEP HCCA
CC GO:0009532 plastid stroma IEP HCCA
CC GO:0009534 chloroplast thylakoid IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009570 chloroplast stroma IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009694 jasmonic acid metabolic process IEP HCCA
BP GO:0009695 jasmonic acid biosynthetic process IEP HCCA
BP GO:0009696 salicylic acid metabolic process IEP HCCA
BP GO:0009697 salicylic acid biosynthetic process IEP HCCA
CC GO:0009941 chloroplast envelope IEP HCCA
BP GO:0010304 PSII associated light-harvesting complex II catabolic process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015386 potassium:proton antiporter activity IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015995 chlorophyll biosynthetic process IEP HCCA
MF GO:0016041 glutamate synthase (ferredoxin) activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
BP GO:0016108 tetraterpenoid metabolic process IEP HCCA
BP GO:0016109 tetraterpenoid biosynthetic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
BP GO:0016116 carotenoid metabolic process IEP HCCA
BP GO:0016117 carotenoid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
MF GO:0016643 oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
BP GO:0018958 phenol-containing compound metabolic process IEP HCCA
BP GO:0019216 regulation of lipid metabolic process IEP HCCA
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019464 glycine decarboxylation via glycine cleavage system IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022821 solute:potassium antiporter activity IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0031407 oxylipin metabolic process IEP HCCA
BP GO:0031408 oxylipin biosynthetic process IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031975 envelope IEP HCCA
CC GO:0031976 plastid thylakoid IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0033559 unsaturated fatty acid metabolic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0042537 benzene-containing compound metabolic process IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
BP GO:0046189 phenol-containing compound biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP HCCA
BP GO:0046471 phosphatidylglycerol metabolic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046490 isopentenyl diphosphate metabolic process IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0051139 metal cation:proton antiporter activity IEP HCCA
BP GO:0051156 glucose 6-phosphate metabolic process IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051347 positive regulation of transferase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0080114 positive regulation of glycine hydroxymethyltransferase activity IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0140828 metal cation:monoatomic cation antiporter activity IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000014 PAS 141 237
IPR000014 PAS 399 491
IPR000719 Prot_kinase_dom 579 864
No external refs found!