AT5G54630

Description : zinc finger protein-related

Gene families : OG0001550 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001550_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G54630

Target	Alias	Description	ECC score	Gene Family Method
AT1G11490	No alias	zinc finger (C2H2 type) family protein	0.02	OrthoFinder output from all 47 species
Aev_g06515	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g16586	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g16997	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g09077	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene29956.t1	Aspi01Gene29956	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene54734.t1	Aspi01Gene54734	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene58391.t1	Aspi01Gene58391	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0305.g063895	No alias	not classified & original description: CDS=1048-1284	0.02	OrthoFinder output from all 47 species
Ceric.39G048600.1	Ceric.39G048600	not classified & original description: pacid=50582455...	0.03	OrthoFinder output from all 47 species
Ehy_g15575	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01008925001	No alias	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.03	OrthoFinder output from all 47 species
Gb_32332	No alias	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
LOC_Os01g57650.1	LOC_Os01g57650	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
MA_13576g0010	No alias	C2H2 zinc finger transcription factor	0.06	OrthoFinder output from all 47 species
MA_5608g0010	No alias	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
Nbi_g13834	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g04292	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g00634	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g07356	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g16226	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014168	No alias	not classified & original description: CDS=1-1884	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018625	No alias	not classified & original description: CDS=1-1434	0.04	OrthoFinder output from all 47 species
Sam_g29609	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc02g079920.3.1	Solyc02g079920	C2H2 zinc finger transcription factor	0.05	OrthoFinder output from all 47 species
Solyc04g081370.2.1	Solyc04g081370	C2H2 zinc finger transcription factor	0.05	OrthoFinder output from all 47 species
Spa_g50745	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g50839	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e008786_P002	Zm00001e008786	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
Zm00001e019606_P002	Zm00001e019606	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Zm00001e024498_P001	Zm00001e024498	C2H2 zinc finger transcription factor	0.05	OrthoFinder output from all 47 species
Zm00001e028937_P001	Zm00001e028937	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0006417	regulation of translation	RCA	Interproscan
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009657	plastid organization	RCA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009965	leaf morphogenesis	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010608	post-transcriptional regulation of gene expression	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0030154	cell differentiation	RCA	Interproscan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0034248	regulation of amide metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045893	positive regulation of DNA-templated transcription	RCA	Interproscan
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1905392	plant organ morphogenesis	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006650	glycerophospholipid metabolic process	IEP	HCCA
BP	GO:0006655	phosphatidylglycerol biosynthetic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0007166	cell surface receptor signaling pathway	IEP	HCCA
BP	GO:0007167	enzyme-linked receptor protein signaling pathway	IEP	HCCA
BP	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	IEP	HCCA
MF	GO:0008374	O-acyltransferase activity	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0009740	gibberellic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009755	hormone-mediated signaling pathway	IEP	HCCA
BP	GO:0010075	regulation of meristem growth	IEP	HCCA
BP	GO:0010143	cutin biosynthetic process	IEP	HCCA
BP	GO:0010162	seed dormancy process	IEP	HCCA
BP	GO:0010476	gibberellin mediated signaling pathway	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
BP	GO:0022611	dormancy process	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0045017	glycerolipid biosynthetic process	IEP	HCCA
BP	GO:0046471	phosphatidylglycerol metabolic process	IEP	HCCA
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	HCCA
BP	GO:0046486	glycerolipid metabolic process	IEP	HCCA
BP	GO:0048609	multicellular organismal reproductive process	IEP	HCCA
BP	GO:0048638	regulation of developmental growth	IEP	HCCA
MF	GO:0090447	glycerol-3-phosphate 2-O-acyltransferase activity	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT5G54630

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation