AT5G39860 (PRE1, BNQ1, BHLH136)

Aliases : PRE1, BNQ1, BHLH136

Description : basic helix-loop-helix (bHLH) DNA-binding family protein

Gene families : OG0009654 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009654_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G39860
Cluster	HCCA: Cluster_59

Target	Alias	Description	ECC score	Gene Family Method
AT1G74500	ATBS1, TMO7, BS1	activation-tagged BRI1(brassinosteroid-insensitive...	0.05	OrthoFinder output from all 47 species
AT3G47710	BNQ3, BHLH161	BANQUO 3	0.04	OrthoFinder output from all 47 species
GSVIVT01008030001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.03	OrthoFinder output from all 47 species
Gb_33750	No alias	transcription factor (bHLH)	0.04	OrthoFinder output from all 47 species
LOC_Os03g07540.1	LOC_Os03g07540	transcription factor (bHLH)	0.02	OrthoFinder output from all 47 species
LOC_Os11g39000.1	ATBS1, TMO7,...	transcription factor (bHLH)	0.04	OrthoFinder output from all 47 species
MA_148495g0010	KDR	transcription factor (bHLH)	0.04	OrthoFinder output from all 47 species
MA_156285g0010	KDR	transcription factor (bHLH)	0.04	OrthoFinder output from all 47 species
MA_9119217g0010	KDR	transcription factor (bHLH)	0.04	OrthoFinder output from all 47 species
Solyc02g067380.4.1	KDR, Solyc02g067380	transcription factor (bHLH)	0.05	OrthoFinder output from all 47 species
Zm00001e023896_P001	KDR, Zm00001e023896	transcription factor (bHLH)	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009640	photomorphogenesis	IMP	Interproscan
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009741	response to brassinosteroid	IEP	Interproscan
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009826	unidimensional cell growth	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0040034	regulation of development, heterochronic	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048506	regulation of timing of meristematic phase transition	None	Extended
BP	GO:0048509	regulation of meristem development	None	Extended
BP	GO:0048510	regulation of timing of transition from vegetative to reproductive phase	IMP	Interproscan
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003999	adenine phosphoribosyltransferase activity	IEP	HCCA
BP	GO:0006144	purine nucleobase metabolic process	IEP	HCCA
BP	GO:0006168	adenine salvage	IEP	HCCA
BP	GO:0009112	nucleobase metabolic process	IEP	HCCA
BP	GO:0009113	purine nucleobase biosynthetic process	IEP	HCCA
MF	GO:0016763	pentosyltransferase activity	IEP	HCCA
BP	GO:0043094	cellular metabolic compound salvage	IEP	HCCA
BP	GO:0043096	purine nucleobase salvage	IEP	HCCA
BP	GO:0043101	purine-containing compound salvage	IEP	HCCA
BP	GO:0046083	adenine metabolic process	IEP	HCCA
BP	GO:0046084	adenine biosynthetic process	IEP	HCCA
BP	GO:0046112	nucleobase biosynthetic process	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
MF	GO:0106130	purine phosphoribosyltransferase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011598	bHLH_dom	22	59

External Links

No external refs found!

AT5G39860 (PRE1, BNQ1, BHLH136)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation