AT5G25890 (IAA28, IAR2)

Aliases : IAA28, IAR2

Description : indole-3-acetic acid inducible 28

Gene families : OG0000146 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000146_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G25890

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00266760	IAA16,...	Auxin-responsive protein IAA16 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
AT1G04250	AXR3, IAA17	AUX/IAA transcriptional regulator family protein	0.04	OrthoFinder output from all 47 species
AT1G04550	IAA12, BDL	AUX/IAA transcriptional regulator family protein	0.05	OrthoFinder output from all 47 species
AT4G14560	IAA1, AXR5	indole-3-acetic acid inducible	0.05	OrthoFinder output from all 47 species
Adi_g014500	IAA13	transcriptional repressor *(IAA/AUX) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g015769	IAA3, SHY2	transcriptional repressor *(IAA/AUX) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g059235	IAA27, PAP2	transcriptional repressor *(IAA/AUX) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g06542	IAA16	transcriptional repressor *(IAA/AUX) & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g07276	IAA27, PAP2	transcriptional repressor *(IAA/AUX) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g16015	IAA13	transcriptional repressor *(IAA/AUX) & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g20366	IAA16	transcriptional repressor *(IAA/AUX) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g14126	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g15869	IAA8	transcriptional repressor *(IAA/AUX) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g25546	IAA16	transcriptional repressor *(IAA/AUX) & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g31358	IAA3, SHY2	transcriptional repressor *(IAA/AUX) & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0007.g011027	SLR, IAA14	transcriptional repressor *(IAA/AUX) & original...	0.02	OrthoFinder output from all 47 species
Azfi_s0157.g053742	SLR, IAA14	transcriptional repressor *(IAA/AUX) & original...	0.02	OrthoFinder output from all 47 species
Azfi_s0159.g053946	IAA29	transcriptional repressor *(IAA/AUX) & original...	0.03	OrthoFinder output from all 47 species
Ceric.09G054500.1	IAA16, Ceric.09G054500	transcriptional repressor *(IAA/AUX) & original...	0.04	OrthoFinder output from all 47 species
Ceric.12G058100.1	IAA13, Ceric.12G058100	transcriptional repressor *(IAA/AUX) & original...	0.03	OrthoFinder output from all 47 species
Ceric.29G001400.1	IAA9, Ceric.29G001400	transcriptional repressor *(IAA/AUX) & original...	0.04	OrthoFinder output from all 47 species
Dcu_g08879	IAA27, PAP2	transcriptional repressor *(IAA/AUX) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g19267	IAA27, PAP2	transcriptional repressor *(IAA/AUX) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g08365	IAA11	transcriptional repressor *(IAA/AUX) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01015350001	IAA27, PAP2	Auxin-responsive protein IAA27 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01017158001	MSG2, IAA19	Auxin-induced protein AUX22 OS=Glycine max	0.04	OrthoFinder output from all 47 species
GSVIVT01017711001	IAA31	Auxin-responsive protein IAA4 OS=Oryza sativa subsp. indica	0.06	OrthoFinder output from all 47 species
GSVIVT01022048001	IAA8	Auxin-responsive protein IAA8 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01035295001	PAP1, IAA26	Phytohormones.auxin.perception and signal...	0.04	OrthoFinder output from all 47 species
Gb_36564	IAA16	Auxin-responsive protein IAA30 OS=Oryza sativa subsp....	0.03	OrthoFinder output from all 47 species
LOC_Os03g43410.1	IAA4, ATAUX2-11,...	Auxin-responsive protein IAA12 OS=Oryza sativa subsp....	0.03	OrthoFinder output from all 47 species
LOC_Os03g58350.1	IAA3, SHY2,...	Auxin-responsive protein IAA14 OS=Oryza sativa subsp....	0.03	OrthoFinder output from all 47 species
LOC_Os06g07040.1	IAA31, LOC_Os06g07040	Auxin-responsive protein IAA20 OS=Oryza sativa subsp....	0.03	OrthoFinder output from all 47 species
LOC_Os06g22870.1	IAA27, PAP2,...	Auxin-responsive protein IAA21 OS=Oryza sativa subsp....	0.03	OrthoFinder output from all 47 species
LOC_Os06g39590.1	AXR3, IAA17,...	Auxin-responsive protein IAA23 OS=Oryza sativa subsp....	0.06	OrthoFinder output from all 47 species
LOC_Os12g40900.1	IAA4, ATAUX2-11,...	Auxin-responsive protein IAA31 OS=Oryza sativa subsp....	0.05	OrthoFinder output from all 47 species
Len_g09711	IAA11	transcriptional repressor *(IAA/AUX) & original description: none	0.02	OrthoFinder output from all 47 species
Len_g35938	IAA16	transcriptional repressor *(IAA/AUX) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g01599	SLR, IAA14	transcriptional repressor *(IAA/AUX) & original description: none	0.02	OrthoFinder output from all 47 species
MA_94744g0010	IAA13	Auxin-responsive protein IAA13 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Ore_g16530	IAA9	transcriptional repressor *(IAA/AUX) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g18021	IAA16	transcriptional repressor *(IAA/AUX) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g20831	IAA11	transcriptional repressor *(IAA/AUX) & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g28306	IAA27, PAP2	transcriptional repressor *(IAA/AUX) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g42005	IAA16	transcriptional repressor *(IAA/AUX) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g31173	IAA13	transcriptional repressor *(IAA/AUX) & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g33082	IAA11	transcriptional repressor *(IAA/AUX) & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g09023	IAA13	transcriptional repressor *(IAA/AUX) & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g19076	IAA9	transcriptional repressor *(IAA/AUX) & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g20021	AXR2, IAA7	transcriptional repressor *(IAA/AUX) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g02139	IAA16	transcriptional repressor *(IAA/AUX) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g11175	IAA8	transcriptional repressor *(IAA/AUX) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g30992	IAA4, ATAUX2-11	transcriptional repressor *(IAA/AUX) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g52299	No alias	transcriptional repressor *(IAA/AUX) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc03g120380.3.1	MSG2, IAA19,...	Auxin-induced protein AUX22 OS=Glycine max...	0.04	OrthoFinder output from all 47 species
Solyc05g008850.4.1	IAA32, MEE10,...	Auxin-responsive protein IAA32 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Solyc06g053830.3.1	IAA16, Solyc06g053830	Auxin-responsive protein IAA16 OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
Spa_g24355	IAA16	transcriptional repressor *(IAA/AUX) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g07173	AXR3, IAA17	transcriptional repressor *(IAA/AUX) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g22326	IAA4, ATAUX2-11	transcriptional repressor *(IAA/AUX) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e005073_P001	IAA3, SHY2,...	Auxin-responsive protein IAA12 OS=Oryza sativa subsp....	0.05	OrthoFinder output from all 47 species
Zm00001e017434_P002	IAA31, Zm00001e017434	Auxin-responsive protein IAA4 OS=Oryza sativa subsp....	0.02	OrthoFinder output from all 47 species
Zm00001e025448_P001	IAA31, Zm00001e025448	Auxin-responsive protein IAA4 OS=Oryza sativa subsp....	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0002682	regulation of immune system process	None	Extended
BP	GO:0002831	regulation of response to biotic stimulus	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	ISS	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006417	regulation of translation	ISS	Interproscan
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006612	protein targeting to membrane	RCA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IMP	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009962	regulation of flavonoid biosynthetic process	None	Extended
BP	GO:0009963	positive regulation of flavonoid biosynthetic process	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010015	root morphogenesis	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010101	post-embryonic root morphogenesis	None	Extended
BP	GO:0010102	lateral root morphogenesis	IMP	Interproscan
BP	GO:0010363	regulation of plant-type hypersensitive response	RCA	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010608	post-transcriptional regulation of gene expression	None	Extended
BP	GO:0010941	regulation of cell death	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0034248	regulation of amide metabolic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043067	regulation of programmed cell death	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043903	regulation of biological process involved in symbiotic interaction	None	Extended
BP	GO:0045088	regulation of innate immune response	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0050776	regulation of immune response	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051668	localization within membrane	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080135	regulation of cellular response to stress	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	None	Extended
BP	GO:0090697	post-embryonic plant organ morphogenesis	None	Extended
BP	GO:0090698	post-embryonic plant morphogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1905392	plant organ morphogenesis	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006826	iron ion transport	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
MF	GO:0008493	tetracycline transmembrane transporter activity	IEP	HCCA
MF	GO:0008514	organic anion transmembrane transporter activity	IEP	HCCA
BP	GO:0009736	cytokinin-activated signaling pathway	IEP	HCCA
BP	GO:0009740	gibberellic acid mediated signaling pathway	IEP	HCCA
BP	GO:0010026	trichome differentiation	IEP	HCCA
BP	GO:0010106	cellular response to iron ion starvation	IEP	HCCA
BP	GO:0010167	response to nitrate	IEP	HCCA
BP	GO:0010476	gibberellin mediated signaling pathway	IEP	HCCA
MF	GO:0015665	alcohol transmembrane transporter activity	IEP	HCCA
CC	GO:0022626	cytosolic ribosome	IEP	HCCA
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	HCCA
MF	GO:0046527	glucosyltransferase activity	IEP	HCCA
MF	GO:0080044	quercetin 7-O-glucosyltransferase activity	IEP	HCCA
MF	GO:1901618	organic hydroxy compound transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR033389	AUX/IAA_dom	125	170
IPR033389	AUX/IAA_dom	27	117

External Links

No external refs found!

AT5G25890 (IAA28, IAR2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation