Aliases : EMB1265, ATCPSF100, CPSF100, ESP5
Description : cleavage and polyadenylation specificity factor 100
Gene families : OG0005611 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005611_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Ceric.09G061000.1 | EMB1265,... | component *(CPSF100/Ydh1) of Cleavage and... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os09g39590.1 | EMB1265,... | component CPSF100/Ydh1 of Cleavage and Polyadenylation... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000278 | mitotic cell cycle | RCA | Interproscan |
MF | GO:0003677 | DNA binding | IPI | Interproscan |
MF | GO:0005515 | protein binding | IPI | Interproscan |
CC | GO:0005634 | nucleus | IDA | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
CC | GO:0005847 | mRNA cleavage and polyadenylation specificity factor complex | ISS | Interproscan |
CC | GO:0005847 | mRNA cleavage and polyadenylation specificity factor complex | NAS | Interproscan |
BP | GO:0006306 | DNA methylation | RCA | Interproscan |
BP | GO:0006378 | mRNA polyadenylation | ISS | Interproscan |
BP | GO:0006379 | mRNA cleavage | ISS | Interproscan |
BP | GO:0006396 | RNA processing | RCA | Interproscan |
BP | GO:0006397 | mRNA processing | RCA | Interproscan |
BP | GO:0007267 | cell-cell signaling | RCA | Interproscan |
BP | GO:0009220 | pyrimidine ribonucleotide biosynthetic process | RCA | Interproscan |
CC | GO:0009506 | plasmodesma | IDA | Interproscan |
BP | GO:0009616 | RNAi-mediated antiviral immune response | RCA | Interproscan |
BP | GO:0009640 | photomorphogenesis | RCA | Interproscan |
BP | GO:0009793 | embryo development ending in seed dormancy | NAS | Interproscan |
BP | GO:0010267 | ta-siRNA processing | RCA | Interproscan |
BP | GO:0016569 | obsolete covalent chromatin modification | RCA | Interproscan |
BP | GO:0031047 | RNA-mediated gene silencing | RCA | Interproscan |
BP | GO:0035194 | RNA-mediated post-transcriptional gene silencing | IMP | Interproscan |
BP | GO:0035196 | miRNA processing | RCA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000003 | reproduction | IEP | HCCA |
CC | GO:0000151 | ubiquitin ligase complex | IEP | HCCA |
BP | GO:0000226 | microtubule cytoskeleton organization | IEP | HCCA |
BP | GO:0000280 | nuclear division | IEP | HCCA |
BP | GO:0000712 | resolution of meiotic recombination intermediates | IEP | HCCA |
CC | GO:0000808 | origin recognition complex | IEP | HCCA |
BP | GO:0000910 | cytokinesis | IEP | HCCA |
BP | GO:0000911 | cytokinesis by cell plate formation | IEP | HCCA |
MF | GO:0003684 | damaged DNA binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006260 | DNA replication | IEP | HCCA |
BP | GO:0006261 | DNA-templated DNA replication | IEP | HCCA |
BP | GO:0006268 | DNA unwinding involved in DNA replication | IEP | HCCA |
BP | GO:0006270 | DNA replication initiation | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
BP | GO:0006346 | DNA methylation-dependent heterochromatin formation | IEP | HCCA |
BP | GO:0006405 | RNA export from nucleus | IEP | HCCA |
BP | GO:0006406 | mRNA export from nucleus | IEP | HCCA |
BP | GO:0006479 | protein methylation | IEP | HCCA |
BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0006997 | nucleus organization | IEP | HCCA |
BP | GO:0007000 | nucleolus organization | IEP | HCCA |
BP | GO:0007010 | cytoskeleton organization | IEP | HCCA |
BP | GO:0007017 | microtubule-based process | IEP | HCCA |
BP | GO:0007020 | microtubule nucleation | IEP | HCCA |
BP | GO:0007062 | sister chromatid cohesion | IEP | HCCA |
BP | GO:0007129 | homologous chromosome pairing at meiosis | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
MF | GO:0008172 | S-methyltransferase activity | IEP | HCCA |
BP | GO:0008213 | protein alkylation | IEP | HCCA |
BP | GO:0008283 | cell population proliferation | IEP | HCCA |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
MF | GO:0008898 | S-adenosylmethionine-homocysteine S-methyltransferase activity | IEP | HCCA |
BP | GO:0009560 | embryo sac egg cell differentiation | IEP | HCCA |
BP | GO:0009880 | embryonic pattern specification | IEP | HCCA |
BP | GO:0009909 | regulation of flower development | IEP | HCCA |
BP | GO:0010050 | vegetative phase change | IEP | HCCA |
BP | GO:0010072 | primary shoot apical meristem specification | IEP | HCCA |
BP | GO:0010074 | maintenance of meristem identity | IEP | HCCA |
BP | GO:0010099 | regulation of photomorphogenesis | IEP | HCCA |
BP | GO:0010100 | negative regulation of photomorphogenesis | IEP | HCCA |
BP | GO:0010162 | seed dormancy process | IEP | HCCA |
BP | GO:0010431 | seed maturation | IEP | HCCA |
BP | GO:0010564 | regulation of cell cycle process | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
BP | GO:0016458 | obsolete gene silencing | IEP | HCCA |
BP | GO:0016570 | histone modification | IEP | HCCA |
BP | GO:0016571 | histone methylation | IEP | HCCA |
BP | GO:0016572 | obsolete histone phosphorylation | IEP | HCCA |
CC | GO:0016604 | nuclear body | IEP | HCCA |
CC | GO:0016607 | nuclear speck | IEP | HCCA |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0018022 | peptidyl-lysine methylation | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
BP | GO:0019827 | stem cell population maintenance | IEP | HCCA |
BP | GO:0022402 | cell cycle process | IEP | HCCA |
BP | GO:0022412 | cellular process involved in reproduction in multicellular organism | IEP | HCCA |
BP | GO:0022611 | dormancy process | IEP | HCCA |
BP | GO:0030154 | cell differentiation | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
BP | GO:0031048 | RNA-mediated heterochromatin formation | IEP | HCCA |
BP | GO:0031056 | regulation of histone modification | IEP | HCCA |
BP | GO:0031060 | regulation of histone methylation | IEP | HCCA |
CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | HCCA |
BP | GO:0031507 | heterochromatin formation | IEP | HCCA |
BP | GO:0031935 | obsolete regulation of chromatin silencing | IEP | HCCA |
BP | GO:0032392 | DNA geometric change | IEP | HCCA |
BP | GO:0032508 | DNA duplex unwinding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0033477 | S-methylmethionine metabolic process | IEP | HCCA |
BP | GO:0033528 | S-methylmethionine cycle | IEP | HCCA |
BP | GO:0034968 | histone lysine methylation | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
BP | GO:0040029 | epigenetic regulation of gene expression | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0045595 | regulation of cell differentiation | IEP | HCCA |
BP | GO:0045814 | negative regulation of gene expression, epigenetic | IEP | HCCA |
BP | GO:0048580 | regulation of post-embryonic development | IEP | HCCA |
BP | GO:0048581 | negative regulation of post-embryonic development | IEP | HCCA |
BP | GO:0048609 | multicellular organismal reproductive process | IEP | HCCA |
BP | GO:0048825 | cotyledon development | IEP | HCCA |
BP | GO:0048831 | regulation of shoot system development | IEP | HCCA |
BP | GO:0048869 | cellular developmental process | IEP | HCCA |
BP | GO:0050657 | nucleic acid transport | IEP | HCCA |
BP | GO:0050658 | RNA transport | IEP | HCCA |
BP | GO:0050793 | regulation of developmental process | IEP | HCCA |
BP | GO:0051028 | mRNA transport | IEP | HCCA |
BP | GO:0051168 | nuclear export | IEP | HCCA |
BP | GO:0051236 | establishment of RNA localization | IEP | HCCA |
BP | GO:0051239 | regulation of multicellular organismal process | IEP | HCCA |
BP | GO:0051241 | negative regulation of multicellular organismal process | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
BP | GO:0051567 | histone H3-K9 methylation | IEP | HCCA |
BP | GO:0051570 | regulation of histone H3-K9 methylation | IEP | HCCA |
BP | GO:0051726 | regulation of cell cycle | IEP | HCCA |
BP | GO:0061647 | histone H3-K9 modification | IEP | HCCA |
BP | GO:0070192 | chromosome organization involved in meiotic cell cycle | IEP | HCCA |
BP | GO:0070828 | heterochromatin organization | IEP | HCCA |
BP | GO:0071103 | DNA conformation change | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
CC | GO:0080008 | Cul4-RING E3 ubiquitin ligase complex | IEP | HCCA |
BP | GO:0080009 | mRNA methylation | IEP | HCCA |
BP | GO:0090421 | embryonic meristem initiation | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
BP | GO:0098727 | maintenance of cell number | IEP | HCCA |
CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
BP | GO:0140718 | facultative heterochromatin formation | IEP | HCCA |
CC | GO:1902494 | catalytic complex | IEP | HCCA |
BP | GO:1903046 | meiotic cell cycle process | IEP | HCCA |
CC | GO:1990234 | transferase complex | IEP | HCCA |
BP | GO:2000026 | regulation of multicellular organismal development | IEP | HCCA |
BP | GO:2000030 | regulation of response to red or far red light | IEP | HCCA |
BP | GO:2000241 | regulation of reproductive process | IEP | HCCA |
No external refs found! |