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AT5G18000 (VDD)


Aliases : VDD

Description : VERDANDI


Gene families : OG0018300 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0018300_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G18000
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AT2G16210 No alias Transcriptional factor B3 family protein 0.04 OrthoFinder output from all 47 species
AT3G17010 No alias AP2/B3-like transcriptional factor family protein 0.04 OrthoFinder output from all 47 species
AT5G09780 No alias Transcriptional factor B3 family protein 0.03 OrthoFinder output from all 47 species
GSVIVT01031850001 No alias RNA biosynthesis.transcriptional activation.B3... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of DNA-templated transcription ISS Interproscan
BP GO:0009553 embryo sac development IMP Interproscan
BP GO:0009567 double fertilization forming a zygote and endosperm IMP Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002237 response to molecule of bacterial origin IEP HCCA
BP GO:0003002 regionalization IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
BP GO:0006308 DNA catabolic process IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
BP GO:0008356 asymmetric cell division IEP HCCA
BP GO:0008360 regulation of cell shape IEP HCCA
BP GO:0009608 response to symbiont IEP HCCA
BP GO:0009610 response to symbiotic fungus IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0009860 pollen tube growth IEP HCCA
BP GO:0009886 post-embryonic animal morphogenesis IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0009900 dehiscence IEP HCCA
BP GO:0009908 flower development IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
BP GO:0010047 fruit dehiscence IEP HCCA
BP GO:0010093 specification of floral organ identity IEP HCCA
BP GO:0010103 stomatal complex morphogenesis IEP HCCA
BP GO:0010160 formation of animal organ boundary IEP HCCA
CC GO:0010169 thioglucosidase complex IEP HCCA
MF GO:0010180 thioglucosidase binding IEP HCCA
BP GO:0010430 fatty acid omega-oxidation IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043455 regulation of secondary metabolic process IEP HCCA
MF GO:0046593 mandelonitrile lyase activity IEP HCCA
BP GO:0048316 seed development IEP HCCA
BP GO:0048367 shoot system development IEP HCCA
BP GO:0048437 floral organ development IEP HCCA
BP GO:0048440 carpel development IEP HCCA
BP GO:0048441 petal development IEP HCCA
BP GO:0048443 stamen development IEP HCCA
BP GO:0048446 petal morphogenesis IEP HCCA
BP GO:0048481 plant ovule development IEP HCCA
BP GO:0048507 meristem development IEP HCCA
BP GO:0048608 reproductive structure development IEP HCCA
BP GO:0048731 system development IEP HCCA
BP GO:0048827 phyllome development IEP HCCA
BP GO:0048859 formation of anatomical boundary IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0080051 cutin transport IEP HCCA
BP GO:0080154 regulation of fertilization IEP HCCA
BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP HCCA
BP GO:0080172 petal epidermis patterning IEP HCCA
BP GO:0090567 reproductive shoot system development IEP HCCA
BP GO:0090626 plant epidermis morphogenesis IEP HCCA
BP GO:0090698 post-embryonic plant morphogenesis IEP HCCA
BP GO:0090701 specification of plant organ identity IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
BP GO:1900376 regulation of secondary metabolite biosynthetic process IEP HCCA
BP GO:2000029 regulation of proanthocyanidin biosynthetic process IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
BP GO:2000762 regulation of phenylpropanoid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 228 304
IPR003340 B3_DNA-bd 20 114
No external refs found!