AT5G15510

Description : TPX2 (targeting protein for Xklp2) protein family

Gene families : OG0003649 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003649_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G15510

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00110p00070440	evm_27.TU.AmTr_v1...	No description available	0.07	OrthoFinder output from all 47 species
Adi_g080102	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g15651	No alias	not classified & original description: none	0.09	OrthoFinder output from all 47 species
Als_g15652	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aop_g21234	No alias	not classified & original description: none	0.09	OrthoFinder output from all 47 species
Aspi01Gene04620.t1	Aspi01Gene04620	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene08613.t1	Aspi01Gene08613	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.02G078000.1	Ceric.02G078000	not classified & original description: pacid=50583911...	0.03	OrthoFinder output from all 47 species
Ceric.10G034200.1	Ceric.10G034200	not classified & original description: pacid=50612324...	0.08	OrthoFinder output from all 47 species
Dcu_g10790	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
GSVIVT01011508001	No alias	No description available	0.09	OrthoFinder output from all 47 species
Gb_00785	No alias	no hits & (original description: none)	0.1	OrthoFinder output from all 47 species
LOC_Os03g11400.1	LOC_Os03g11400	no hits & (original description: none)	0.09	OrthoFinder output from all 47 species
Len_g15527	No alias	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Lfl_g27421	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
MA_8291g0010	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Mp1g24770.1	No alias	no hits & (original description: none)	0.08	OrthoFinder output from all 47 species
Mp3g08770.1	No alias	no hits & (original description: none)	0.11	OrthoFinder output from all 47 species
Msp_g14117	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Msp_g28682	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Nbi_g29711	No alias	not classified & original description: none	0.1	OrthoFinder output from all 47 species
Ppi_g17903	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc02g066980.1.1	Solyc02g066980	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Solyc02g067100.3.1	Solyc02g067100	no hits & (original description: none)	0.09	OrthoFinder output from all 47 species
Spa_g51324	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Tin_g44369	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Zm00001e000831_P002	Zm00001e000831	no hits & (original description: none)	0.11	OrthoFinder output from all 47 species
Zm00001e038734_P002	Zm00001e038734	no hits & (original description: none)	0.12	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	RCA	Interproscan
BP	GO:0000910	cytokinesis	None	Extended
BP	GO:0000911	cytokinesis by cell plate formation	RCA	Interproscan
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	RCA	Interproscan
BP	GO:0006304	DNA modification	None	Extended
BP	GO:0006305	DNA alkylation	None	Extended
BP	GO:0006306	DNA methylation	RCA	Interproscan
BP	GO:0006479	protein methylation	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	None	Extended
BP	GO:0007017	microtubule-based process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008213	protein alkylation	None	Extended
BP	GO:0008283	cell population proliferation	RCA	Interproscan
BP	GO:0009909	regulation of flower development	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016458	obsolete gene silencing	RCA	Interproscan
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016571	histone methylation	None	Extended
BP	GO:0018022	peptidyl-lysine methylation	None	Extended
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034968	histone lysine methylation	RCA	Interproscan
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044728	DNA methylation or demethylation	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048831	regulation of shoot system development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051567	histone H3-K9 methylation	RCA	Interproscan
BP	GO:0061647	histone H3-K9 modification	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000012	single strand break repair	IEP	HCCA
MF	GO:0000166	nucleotide binding	IEP	HCCA
CC	GO:0000228	nuclear chromosome	IEP	HCCA
BP	GO:0000280	nuclear division	IEP	HCCA
BP	GO:0000723	telomere maintenance	IEP	HCCA
BP	GO:0000724	double-strand break repair via homologous recombination	IEP	HCCA
BP	GO:0000725	recombinational repair	IEP	HCCA
CC	GO:0000793	condensed chromosome	IEP	HCCA
CC	GO:0000794	condensed nuclear chromosome	IEP	HCCA
CC	GO:0000808	origin recognition complex	IEP	HCCA
BP	GO:0001558	regulation of cell growth	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0003712	transcription coregulator activity	IEP	HCCA
MF	GO:0003713	transcription coactivator activity	IEP	HCCA
MF	GO:0003909	DNA ligase activity	IEP	HCCA
MF	GO:0003910	DNA ligase (ATP) activity	IEP	HCCA
MF	GO:0004519	endonuclease activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005622	intracellular anatomical structure	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
BP	GO:0006261	DNA-templated DNA replication	IEP	HCCA
BP	GO:0006266	DNA ligation	IEP	HCCA
BP	GO:0006270	DNA replication initiation	IEP	HCCA
BP	GO:0006275	regulation of DNA replication	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006302	double-strand break repair	IEP	HCCA
BP	GO:0006310	DNA recombination	IEP	HCCA
BP	GO:0006312	mitotic recombination	IEP	HCCA
BP	GO:0006346	DNA methylation-dependent heterochromatin formation	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
BP	GO:0007059	chromosome segregation	IEP	HCCA
BP	GO:0007129	homologous chromosome pairing at meiosis	IEP	HCCA
BP	GO:0007140	male meiotic nuclear division	IEP	HCCA
BP	GO:0008156	negative regulation of DNA replication	IEP	HCCA
BP	GO:0009566	fertilization	IEP	HCCA
BP	GO:0009567	double fertilization forming a zygote and endosperm	IEP	HCCA
BP	GO:0009892	negative regulation of metabolic process	IEP	HCCA
BP	GO:0010212	response to ionizing radiation	IEP	HCCA
BP	GO:0010332	response to gamma radiation	IEP	HCCA
MF	GO:0010385	double-stranded methylated DNA binding	IEP	HCCA
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010948	negative regulation of cell cycle process	IEP	HCCA
BP	GO:0016444	somatic cell DNA recombination	IEP	HCCA
MF	GO:0016886	ligase activity, forming phosphoric ester bonds	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0022603	regulation of anatomical structure morphogenesis	IEP	HCCA
BP	GO:0022604	regulation of cell morphogenesis	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0032200	telomere organization	IEP	HCCA
BP	GO:0032204	regulation of telomere maintenance	IEP	HCCA
BP	GO:0032875	regulation of DNA endoreduplication	IEP	HCCA
BP	GO:0032876	negative regulation of DNA endoreduplication	IEP	HCCA
BP	GO:0033044	regulation of chromosome organization	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0042023	DNA endoreduplication	IEP	HCCA
BP	GO:0042138	meiotic DNA double-strand break formation	IEP	HCCA
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0043247	telomere maintenance in response to DNA damage	IEP	HCCA
BP	GO:0044786	cell cycle DNA replication	IEP	HCCA
BP	GO:0045132	meiotic chromosome segregation	IEP	HCCA
BP	GO:0045786	negative regulation of cell cycle	IEP	HCCA
BP	GO:0048285	organelle fission	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051052	regulation of DNA metabolic process	IEP	HCCA
BP	GO:0051053	negative regulation of DNA metabolic process	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051510	regulation of unidimensional cell growth	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
BP	GO:0051726	regulation of cell cycle	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0061982	meiosis I cell cycle process	IEP	HCCA
BP	GO:0070192	chromosome organization involved in meiotic cell cycle	IEP	HCCA
CC	GO:0080008	Cul4-RING E3 ubiquitin ligase complex	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
BP	GO:0090305	nucleic acid phosphodiester bond hydrolysis	IEP	HCCA
BP	GO:0090329	regulation of DNA-templated DNA replication	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
BP	GO:0098813	nuclear chromosome segregation	IEP	HCCA
BP	GO:0140013	meiotic nuclear division	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
BP	GO:0140718	facultative heterochromatin formation	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:2000104	negative regulation of DNA-templated DNA replication	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR027329	TPX2_C	386	442

External Links

No external refs found!

AT5G15510

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation