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  5. AT5G08740

AT5G08740 (NDC1)


Aliases : NDC1

Description : NAD(P)H dehydrogenase C1


Gene families : OG0005931 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005931_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G08740
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Ceric.34G071300.1 NDC1, Ceric.34G071300 NAD(P)H dehydrogenase *(NDC) & original description:... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020660.34 NDC1 No description available 0.01 OrthoFinder output from all 47 species
Dde_g24453 NDC1 NAD(P)H dehydrogenase *(NDC) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28720 NDC1 NAD(P)H dehydrogenase *(NDC) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10080571g0010 NDC1 Alternative NAD(P)H-ubiquinone oxidoreductase C1,... 0.03 OrthoFinder output from all 47 species
MA_910768g0010 NDC1 Alternative NAD(P)H-ubiquinone oxidoreductase C1,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity ISS Interproscan
CC GO:0005618 cell wall IDA Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009534 chloroplast thylakoid IDA Interproscan
CC GO:0010287 plastoglobule IDA Interproscan
CC GO:0031304 obsolete intrinsic component of mitochondrial inner membrane IDA Interproscan
BP GO:0042744 hydrogen peroxide catabolic process RCA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008252 nucleotidase activity IEP HCCA
MF GO:0008253 5'-nucleotidase activity IEP HCCA
CC GO:0009295 nucleoid IEP HCCA
CC GO:0009527 plastid outer membrane IEP HCCA
CC GO:0009535 chloroplast thylakoid membrane IEP HCCA
BP GO:0009642 response to light intensity IEP HCCA
BP GO:0009657 plastid organization IEP HCCA
BP GO:0009658 chloroplast organization IEP HCCA
CC GO:0009707 chloroplast outer membrane IEP HCCA
BP GO:0010020 chloroplast fission IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031312 extrinsic component of organelle membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0031969 chloroplast membrane IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0035452 extrinsic component of plastid membrane IEP HCCA
CC GO:0042170 plastid membrane IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
CC GO:0042644 chloroplast nucleoid IEP HCCA
CC GO:0042646 plastid nucleoid IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0043572 plastid fission IEP HCCA
MF GO:0043621 protein self-association IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
CC GO:0055035 plastid thylakoid membrane IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR023753 FAD/NAD-binding_dom 82 419
No external refs found!