1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT4G39920

AT4G39920 (POR, TFC C)


Aliases : POR, TFC C

Description : C-CAP/cofactor C-like domain-containing protein


Gene families : OG0003797 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003797_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G39920
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0104.g044729 POR, TFC C cofactor of post-CCT Tubulin folding pathway *(TFC-C) &... 0.03 OrthoFinder output from all 47 species
Sam_g29309 No alias cofactor of post-CCT Tubulin folding pathway *(TFC-C) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IMP Interproscan
CC GO:0005737 cytoplasm IDA Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0007021 tubulin complex assembly IGI Interproscan
BP GO:0007021 tubulin complex assembly ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0000912 assembly of actomyosin apparatus involved in cytokinesis IEP HCCA
BP GO:0000914 phragmoplast assembly IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004564 beta-fructofuranosidase activity IEP HCCA
CC GO:0005635 nuclear envelope IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005874 microtubule IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0005987 sucrose catabolic process IEP HCCA
BP GO:0006084 acetyl-CoA metabolic process IEP HCCA
BP GO:0006637 acyl-CoA metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0007020 microtubule nucleation IEP HCCA
MF GO:0008514 organic anion transmembrane transporter activity IEP HCCA
MF GO:0008676 3-deoxy-8-phosphooctulonate synthase activity IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009313 oligosaccharide catabolic process IEP HCCA
BP GO:0009553 embryo sac development IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
BP GO:0010306 rhamnogalacturonan II biosynthetic process IEP HCCA
BP GO:0010393 galacturonan metabolic process IEP HCCA
BP GO:0010396 rhamnogalacturonan II metabolic process IEP HCCA
BP GO:0016049 cell growth IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0019294 keto-3-deoxy-D-manno-octulosonic acid biosynthetic process IEP HCCA
BP GO:0031109 microtubule polymerization or depolymerization IEP HCCA
CC GO:0031307 obsolete integral component of mitochondrial outer membrane IEP HCCA
BP GO:0032506 cytokinetic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0035383 thioester metabolic process IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042816 vitamin B6 metabolic process IEP HCCA
BP GO:0042819 vitamin B6 biosynthetic process IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044275 cellular carbohydrate catabolic process IEP HCCA
BP GO:0045488 pectin metabolic process IEP HCCA
BP GO:0045489 pectin biosynthetic process IEP HCCA
BP GO:0046352 disaccharide catabolic process IEP HCCA
BP GO:0046400 keto-3-deoxy-D-manno-octulosonic acid metabolic process IEP HCCA
BP GO:0046785 microtubule polymerization IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048768 root hair cell tip growth IEP HCCA
BP GO:0048868 pollen tube development IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
BP GO:0052325 cell wall pectin biosynthetic process IEP HCCA
BP GO:0052546 cell wall pectin metabolic process IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0099081 supramolecular polymer IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
CC GO:0099512 supramolecular fiber IEP HCCA
CC GO:0099513 polymeric cytoskeletal fiber IEP HCCA
BP GO:1902407 assembly of actomyosin apparatus involved in mitotic cytokinesis IEP HCCA
BP GO:1902410 mitotic cytokinetic process IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR031925 TBCC_N 26 141
IPR012945 Tubulin-bd_cofactor_C_dom 200 316
No external refs found!