AT4G39080 (VHA-A3)


Aliases : VHA-A3

Description : vacuolar proton ATPase A3


Gene families : OG0001824 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001824_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G39080

Target Alias Description ECC score Gene Family Method Actions
Ala_g11864 VHA-A2 subunit a of V-type ATPase membrane V0 subcomplex &... 0.03 OrthoFinder output from all 47 species
Aob_g03533 VHA-A3 subunit a of V-type ATPase membrane V0 subcomplex &... 0.04 OrthoFinder output from all 47 species
Aop_g01823 VHA-A3 subunit a of V-type ATPase membrane V0 subcomplex &... 0.04 OrthoFinder output from all 47 species
Aop_g10749 VHA-A3 subunit a of V-type ATPase membrane V0 subcomplex &... 0.04 OrthoFinder output from all 47 species
Azfi_s0004.g008880 VHA-A3 subunit a of V-type ATPase membrane V0 subcomplex &... 0.09 OrthoFinder output from all 47 species
Azfi_s0548.g076432 VHA-A3 subunit a of V-type ATPase membrane V0 subcomplex &... 0.05 OrthoFinder output from all 47 species
Ceric.21G018800.1 VHA-A2, Ceric.21G018800 subunit a of V-type ATPase membrane V0 subcomplex &... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000093.146 VHA-A2 V-type proton ATPase subunit a2 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Cre04.g220350 VHA-A3 Solute transport.primary active transport.V-type ATPase... 0.03 OrthoFinder output from all 47 species
Cre09.g402500 VHA-A2 Solute transport.primary active transport.V-type ATPase... 0.08 OrthoFinder output from all 47 species
GSVIVT01024208001 VHA-A2 Solute transport.primary active transport.V-type ATPase... 0.04 OrthoFinder output from all 47 species
LOC_Os10g10500.1 VHA-A2, LOC_Os10g10500 subunit a of V-type ATPase membrane V0 subcomplex 0.04 OrthoFinder output from all 47 species
Lfl_g02233 VHA-A3 subunit a of V-type ATPase membrane V0 subcomplex &... 0.04 OrthoFinder output from all 47 species
Mp3g15140.1 VHA-A3 subunit a of V-type ATPase membrane V0 subcomplex 0.12 OrthoFinder output from all 47 species
Nbi_g04395 VHA-A3 subunit a of V-type ATPase membrane V0 subcomplex &... 0.03 OrthoFinder output from all 47 species
Ppi_g03217 VHA-A2 subunit a of V-type ATPase membrane V0 subcomplex &... 0.06 OrthoFinder output from all 47 species
Sam_g19376 No alias subunit a of V-type ATPase membrane V0 subcomplex &... 0.06 OrthoFinder output from all 47 species
Solyc01g110120.3.1 VHA-A3, Solyc01g110120 subunit a of V-type ATPase membrane V0 subcomplex 0.1 OrthoFinder output from all 47 species
Solyc11g072530.2.1 VHA-A1, Solyc11g072530 subunit a of V-type ATPase membrane V0 subcomplex 0.04 OrthoFinder output from all 47 species
Spa_g04609 VHA-A3 subunit a of V-type ATPase membrane V0 subcomplex &... 0.02 OrthoFinder output from all 47 species
Tin_g04698 VHA-A3 subunit a of V-type ATPase membrane V0 subcomplex &... 0.05 OrthoFinder output from all 47 species
Zm00001e001056_P001 VHA-A2, Zm00001e001056 subunit a of V-type ATPase membrane V0 subcomplex 0.15 OrthoFinder output from all 47 species
Zm00001e038568_P001 VHA-A3, Zm00001e038568 subunit a of V-type ATPase membrane V0 subcomplex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000325 plant-type vacuole IDA Interproscan
BP GO:0000902 cell morphogenesis RCA Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005773 vacuole IDA Interproscan
CC GO:0005774 vacuolar membrane IDA Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006816 calcium ion transport RCA Interproscan
BP GO:0007030 Golgi organization RCA Interproscan
BP GO:0007033 vacuole organization RCA Interproscan
CC GO:0009507 chloroplast IDA Interproscan
BP GO:0009651 response to salt stress RCA Interproscan
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IDA Interproscan
CC GO:0009705 plant-type vacuole membrane IDA Interproscan
CC GO:0009941 chloroplast envelope IDA Interproscan
BP GO:0015986 proton motive force-driven ATP synthesis IDA Interproscan
CC GO:0016020 membrane IDA Interproscan
BP GO:0016049 cell growth RCA Interproscan
MF GO:0016887 ATP hydrolysis activity ISS Interproscan
BP GO:0031669 cellular response to nutrient levels IGI Interproscan
BP GO:0032119 sequestering of zinc ion IMP Interproscan
BP GO:0043181 vacuolar sequestering IMP Interproscan
MF GO:0045735 nutrient reservoir activity IMP Interproscan
BP GO:0048193 Golgi vesicle transport RCA Interproscan
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IMP Interproscan
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0002020 protease binding IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
CC GO:0005874 microtubule IEP HCCA
CC GO:0005881 cytoplasmic microtubule IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0005982 starch metabolic process IEP HCCA
BP GO:0006007 glucose catabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006098 pentose-phosphate shunt IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006598 polyamine catabolic process IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006740 NADPH regeneration IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006833 water transport IEP HCCA
BP GO:0006972 hyperosmotic response IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008361 regulation of cell size IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009310 amine catabolic process IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009411 response to UV IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009698 phenylpropanoid metabolic process IEP HCCA
BP GO:0009743 response to carbohydrate IEP HCCA
BP GO:0009746 response to hexose IEP HCCA
BP GO:0009750 response to fructose IEP HCCA
BP GO:0009825 multidimensional cell growth IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009832 plant-type cell wall biogenesis IEP HCCA
BP GO:0009833 plant-type primary cell wall biogenesis IEP HCCA
CC GO:0009897 external side of plasma membrane IEP HCCA
BP GO:0009914 hormone transport IEP HCCA
BP GO:0009926 auxin polar transport IEP HCCA
CC GO:0009930 longitudinal side of cell surface IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
CC GO:0010005 cortical microtubule, transverse to long axis IEP HCCA
BP GO:0010015 root morphogenesis IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
CC GO:0010330 cellulose synthase complex IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0010583 response to cyclopentenone IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
BP GO:0019320 hexose catabolic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0030865 cortical cytoskeleton organization IEP HCCA
BP GO:0031122 cytoplasmic microtubule organization IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034284 response to monosaccharide IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042044 fluid transport IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0042402 cellular biogenic amine catabolic process IEP HCCA
BP GO:0042538 hyperosmotic salinity response IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043473 pigmentation IEP HCCA
BP GO:0043476 pigment accumulation IEP HCCA
BP GO:0043478 pigment accumulation in response to UV light IEP HCCA
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP HCCA
BP GO:0043480 pigment accumulation in tissues IEP HCCA
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP HCCA
BP GO:0043622 cortical microtubule organization IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
BP GO:0046365 monosaccharide catabolic process IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0046658 obsolete anchored component of plasma membrane IEP HCCA
BP GO:0046686 response to cadmium ion IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
BP GO:0051017 actin filament bundle assembly IEP HCCA
BP GO:0051156 glucose 6-phosphate metabolic process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0055028 cortical microtubule IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0060918 auxin transport IEP HCCA
BP GO:0061572 actin filament bundle organization IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
CC GO:0098552 side of membrane IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0099081 supramolecular polymer IEP HCCA
CC GO:0099512 supramolecular fiber IEP HCCA
CC GO:0099513 polymeric cytoskeletal fiber IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR002490 V-ATPase_116kDa_su 40 813
No external refs found!