AT4G34460 (AGB1, ATAGB1, ELK4)

Aliases : AGB1, ATAGB1, ELK4

Description : GTP binding protein beta 1

Gene families : OG0002924 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002924_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G34460

Target	Alias	Description	ECC score	Gene Family Method
Aev_g17207	AGB1, ATAGB1, ELK4	component beta of heterotrimeric G-protein complex &...	0.02	OrthoFinder output from all 47 species
Cba_g09550	AGB1, ATAGB1, ELK4	component beta of heterotrimeric G-protein complex &...	0.04	OrthoFinder output from all 47 species
Ceric.05G079300.1	AGB1, ATAGB1,...	component beta of heterotrimeric G-protein complex &...	0.03	OrthoFinder output from all 47 species
Pir_g02823	AGB1, ATAGB1, ELK4	component beta of heterotrimeric G-protein complex &...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	None	Extended
BP	GO:0000165	MAPK cascade	RCA	Interproscan
MF	GO:0000166	nucleotide binding	ISS	Interproscan
BP	GO:0002682	regulation of immune system process	None	Extended
BP	GO:0002831	regulation of response to biotic stimulus	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IDA	Interproscan
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005783	endoplasmic reticulum	IDA	Interproscan
CC	GO:0005834	heterotrimeric G-protein complex	IDA	Interproscan
CC	GO:0005834	heterotrimeric G-protein complex	IPI	Interproscan
CC	GO:0005834	heterotrimeric G-protein complex	ISS	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	RCA	Interproscan
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006612	protein targeting to membrane	RCA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0007154	cell communication	RCA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009409	response to cold	RCA	Interproscan
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	RCA	Interproscan
BP	GO:0009620	response to fungus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009723	response to ethylene	IMP	Interproscan
BP	GO:0009723	response to ethylene	RCA	Interproscan
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	RCA	Interproscan
BP	GO:0009738	abscisic acid-activated signaling pathway	RCA	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009787	regulation of abscisic acid-activated signaling pathway	None	Extended
BP	GO:0009788	negative regulation of abscisic acid-activated signaling pathway	IMP	Interproscan
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009845	seed germination	IMP	Interproscan
BP	GO:0009845	seed germination	IEP	Interproscan
BP	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009863	salicylic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009867	jasmonic acid mediated signaling pathway	IMP	Interproscan
BP	GO:0009867	jasmonic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009887	animal organ morphogenesis	IMP	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0009968	negative regulation of signal transduction	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	IMP	Interproscan
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010154	fruit development	IMP	Interproscan
BP	GO:0010200	response to chitin	RCA	Interproscan
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0010310	regulation of hydrogen peroxide metabolic process	RCA	Interproscan
BP	GO:0010363	regulation of plant-type hypersensitive response	RCA	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0010648	negative regulation of cell communication	None	Extended
BP	GO:0010941	regulation of cell death	None	Extended
BP	GO:0015031	protein transport	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019220	regulation of phosphate metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
BP	GO:0023057	negative regulation of signaling	None	Extended
BP	GO:0030968	endoplasmic reticulum unfolded protein response	IMP	Interproscan
BP	GO:0030968	endoplasmic reticulum unfolded protein response	RCA	Interproscan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0031348	negative regulation of defense response	RCA	Interproscan
BP	GO:0031399	regulation of protein modification process	None	Extended
CC	GO:0031461	cullin-RING ubiquitin ligase complex	None	Extended
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0034976	response to endoplasmic reticulum stress	None	Extended
BP	GO:0035303	regulation of dephosphorylation	None	Extended
BP	GO:0035304	regulation of protein dephosphorylation	RCA	Interproscan
BP	GO:0035556	intracellular signal transduction	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042743	hydrogen peroxide metabolic process	None	Extended
BP	GO:0042744	hydrogen peroxide catabolic process	RCA	Interproscan
BP	GO:0043067	regulation of programmed cell death	None	Extended
BP	GO:0043069	negative regulation of programmed cell death	RCA	Interproscan
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043903	regulation of biological process involved in symbiotic interaction	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045088	regulation of innate immune response	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048193	Golgi vesicle transport	RCA	Interproscan
BP	GO:0048364	root development	IMP	Interproscan
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048527	lateral root development	IMP	Interproscan
BP	GO:0048527	lateral root development	RCA	Interproscan
BP	GO:0048528	post-embryonic root development	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048585	negative regulation of response to stimulus	None	Extended
BP	GO:0048608	reproductive structure development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050776	regulation of immune response	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050832	defense response to fungus	IMP	Interproscan
BP	GO:0050832	defense response to fungus	RCA	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051174	regulation of phosphorus metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051668	localization within membrane	None	Extended
BP	GO:0051707	response to other organism	RCA	Interproscan
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0060548	negative regulation of cell death	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072593	reactive oxygen species metabolic process	IMP	Interproscan
BP	GO:0072657	protein localization to membrane	None	Extended
CC	GO:0080008	Cul4-RING E3 ubiquitin ligase complex	IPI	Interproscan
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080135	regulation of cellular response to stress	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	None	Extended
BP	GO:0090696	post-embryonic plant organ development	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098797	plasma membrane protein complex	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901419	regulation of response to alcohol	None	Extended
BP	GO:1901420	negative regulation of response to alcohol	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
CC	GO:1905360	GTPase complex	None	Extended
BP	GO:1905957	regulation of cellular response to alcohol	None	Extended
BP	GO:1905958	negative regulation of cellular response to alcohol	None	Extended
CC	GO:1990234	transferase complex	None	Extended
BP	GO:2000377	regulation of reactive oxygen species metabolic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000910	cytokinesis	IEP	HCCA
BP	GO:0000911	cytokinesis by cell plate formation	IEP	HCCA
BP	GO:0002252	immune effector process	IEP	HCCA
BP	GO:0002376	immune system process	IEP	HCCA
BP	GO:0002679	respiratory burst involved in defense response	IEP	HCCA
MF	GO:0005484	SNAP receptor activity	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006497	protein lipidation	IEP	HCCA
BP	GO:0006498	N-terminal protein lipidation	IEP	HCCA
BP	GO:0006499	N-terminal protein myristoylation	IEP	HCCA
BP	GO:0006820	monoatomic anion transport	IEP	HCCA
BP	GO:0006862	nucleotide transport	IEP	HCCA
BP	GO:0006865	amino acid transport	IEP	HCCA
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0006955	immune response	IEP	HCCA
CC	GO:0009504	cell plate	IEP	HCCA
BP	GO:0009595	detection of biotic stimulus	IEP	HCCA
BP	GO:0009612	response to mechanical stimulus	IEP	HCCA
BP	GO:0009625	response to insect	IEP	HCCA
BP	GO:0009627	systemic acquired resistance	IEP	HCCA
BP	GO:0009694	jasmonic acid metabolic process	IEP	HCCA
BP	GO:0009695	jasmonic acid biosynthetic process	IEP	HCCA
BP	GO:0009696	salicylic acid metabolic process	IEP	HCCA
BP	GO:0009697	salicylic acid biosynthetic process	IEP	HCCA
BP	GO:0009753	response to jasmonic acid	IEP	HCCA
BP	GO:0009962	regulation of flavonoid biosynthetic process	IEP	HCCA
BP	GO:0009963	positive regulation of flavonoid biosynthetic process	IEP	HCCA
BP	GO:0015748	organophosphate ester transport	IEP	HCCA
BP	GO:0015802	basic amino acid transport	IEP	HCCA
BP	GO:0015849	organic acid transport	IEP	HCCA
BP	GO:0015931	nucleobase-containing compound transport	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
BP	GO:0018377	protein myristoylation	IEP	HCCA
BP	GO:0018958	phenol-containing compound metabolic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
MF	GO:0030674	protein-macromolecule adaptor activity	IEP	HCCA
BP	GO:0031365	N-terminal protein amino acid modification	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0032879	regulation of localization	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0042537	benzene-containing compound metabolic process	IEP	HCCA
BP	GO:0043090	amino acid import	IEP	HCCA
BP	GO:0043269	regulation of monoatomic ion transport	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0043543	protein acylation	IEP	HCCA
BP	GO:0043900	obsolete regulation of multi-organism process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0045087	innate immune response	IEP	HCCA
BP	GO:0045730	respiratory burst	IEP	HCCA
BP	GO:0046189	phenol-containing compound biosynthetic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0051049	regulation of transport	IEP	HCCA
BP	GO:0051606	detection of stimulus	IEP	HCCA
MF	GO:0060090	molecular adaptor activity	IEP	HCCA
BP	GO:0070542	response to fatty acid	IEP	HCCA
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001680	WD40_repeat	201	233
IPR001680	WD40_repeat	282	323
IPR001680	WD40_repeat	109	134
IPR001680	WD40_repeat	57	93
IPR001680	WD40_repeat	241	276
IPR001680	WD40_repeat	150	185
IPR001680	WD40_repeat	339	368

External Links

No external refs found!

AT4G34460 (AGB1, ATAGB1, ELK4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation