AT4G26690 (GPDL2, SHV3, MRH5)

Aliases : GPDL2, SHV3, MRH5

Description : PLC-like phosphodiesterase family protein

Gene families : OG0002387 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002387_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G26690
Cluster	HCCA: Cluster_106

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00055p00174750	GPDL2, SHV3,...	Glycerophosphodiester phosphodiesterase GDPDL3...	0.06	OrthoFinder output from all 47 species
AMTR_s00252p00015420	SVL4,...	Glycerophosphodiester phosphodiesterase GDPDL6...	0.1	OrthoFinder output from all 47 species
AT5G58050	SVL4	SHV3-like 4	0.06	OrthoFinder output from all 47 species
AT5G58170	SVL5	SHV3-like 5	0.08	OrthoFinder output from all 47 species
Aev_g15087	GPDL2, SHV3, MRH5	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g40029	GPDL2, SHV3, MRH5	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g05086	SVL5	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g08832	SVL4	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g15330	GPDL2, SHV3, MRH5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g23324	SVL4	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g07994	SVL4	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01003731001	SVL5	Glycerophosphodiester phosphodiesterase GDPDL6...	0.06	OrthoFinder output from all 47 species
LOC_Os02g09450.1	SVL5, LOC_Os02g09450	Glycerophosphodiester phosphodiesterase GDPDL7...	0.06	OrthoFinder output from all 47 species
LOC_Os04g39610.1	GPDL2, SHV3,...	Glycerophosphodiester phosphodiesterase GDPDL4...	0.04	OrthoFinder output from all 47 species
LOC_Os09g17000.1	SVL2, LOC_Os09g17000	Protein SUPPRESSOR OF NPR1-1 CONSTITUTIVE 4...	0.06	OrthoFinder output from all 47 species
Len_g08984	SVL5	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g20356	SVL2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_10434415g0020	SNC4	Protein SUPPRESSOR OF NPR1-1 CONSTITUTIVE 4...	0.04	OrthoFinder output from all 47 species
MA_8306g0010	SVL3	Glycerophosphodiester phosphodiesterase GDPDL5...	0.03	OrthoFinder output from all 47 species
Mp8g07940.1	SVL5	Glycerophosphodiester phosphodiesterase GDPDL7...	0.05	OrthoFinder output from all 47 species
Msp_g26126	SVL5	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g10791	SVL5	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g26745	SVL5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g05893	SVL5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0122.g021443	SVL5	not classified & original description: CDS=22-1383	0.03	OrthoFinder output from all 47 species
Solyc02g014490.4.1	SVL4, Solyc02g014490	Glycerophosphodiester phosphodiesterase GDPDL7...	0.06	OrthoFinder output from all 47 species
Solyc02g014530.4.1	SVL4, Solyc02g014530	Glycerophosphodiester phosphodiesterase GDPDL6...	0.04	OrthoFinder output from all 47 species
Solyc07g065120.3.1	SVL1, Solyc07g065120	Glycerophosphodiester phosphodiesterase GDPDL4...	0.16	OrthoFinder output from all 47 species
Spa_g40260	SVL1	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Zm00001e025069_P001	SVL5, Zm00001e025069	Glycerophosphodiester phosphodiesterase GDPDL7...	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005618	cell wall	None	Extended
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006066	alcohol metabolic process	None	Extended
BP	GO:0006071	glycerol metabolic process	ISS	Interproscan
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006694	steroid biosynthetic process	None	Extended
MF	GO:0008081	phosphoric diester hydrolase activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008202	steroid metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
MF	GO:0008889	glycerophosphodiester phosphodiesterase activity	ISS	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009505	plant-type cell wall	IDA	Interproscan
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009832	plant-type cell wall biogenesis	RCA	Interproscan
BP	GO:0009932	cell tip growth	IMP	Interproscan
BP	GO:0009932	cell tip growth	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010026	trichome differentiation	IGI	Interproscan
BP	GO:0010053	root epidermal cell differentiation	IMP	Interproscan
BP	GO:0010383	cell wall polysaccharide metabolic process	None	Extended
BP	GO:0010393	galacturonan metabolic process	None	Extended
BP	GO:0010442	guard cell morphogenesis	IGI	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0016049	cell growth	RCA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	RCA	Interproscan
BP	GO:0016125	sterol metabolic process	None	Extended
BP	GO:0016126	sterol biosynthetic process	RCA	Interproscan
MF	GO:0016301	kinase activity	ISS	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
BP	GO:0019400	alditol metabolic process	None	Extended
BP	GO:0019751	polyol metabolic process	None	Extended
BP	GO:0021700	developmental maturation	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0030243	cellulose metabolic process	RCA	Interproscan
CC	GO:0030312	external encapsulating structure	None	Extended
CC	GO:0031225	obsolete anchored component of membrane	TAS	Interproscan
BP	GO:0032502	developmental process	None	Extended
BP	GO:0034406	cell wall beta-glucan metabolic process	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042546	cell wall biogenesis	None	Extended
MF	GO:0042578	phosphoric ester hydrolase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0045488	pectin metabolic process	None	Extended
CC	GO:0046658	obsolete anchored component of plasma membrane	IDA	Interproscan
BP	GO:0048469	cell maturation	None	Extended
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048764	trichoblast maturation	None	Extended
BP	GO:0048765	root hair cell differentiation	IMP	Interproscan
BP	GO:0048765	root hair cell differentiation	RCA	Interproscan
BP	GO:0048767	root hair elongation	RCA	Interproscan
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0052541	plant-type cell wall cellulose metabolic process	IGI	Interproscan
BP	GO:0052541	plant-type cell wall cellulose metabolic process	RCA	Interproscan
BP	GO:0052546	cell wall pectin metabolic process	RCA	Interproscan
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071695	anatomical structure maturation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090627	plant epidermal cell differentiation	None	Extended
BP	GO:0090698	post-embryonic plant morphogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001558	regulation of cell growth	IEP	HCCA
MF	GO:0002020	protease binding	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0004871	obsolete signal transducer activity	IEP	HCCA
MF	GO:0005199	structural constituent of cell wall	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
CC	GO:0005911	cell-cell junction	IEP	HCCA
BP	GO:0006007	glucose catabolic process	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006706	steroid catabolic process	IEP	HCCA
BP	GO:0007155	cell adhesion	IEP	HCCA
BP	GO:0007267	cell-cell signaling	IEP	HCCA
CC	GO:0009506	plasmodesma	IEP	HCCA
BP	GO:0009741	response to brassinosteroid	IEP	HCCA
BP	GO:0009742	brassinosteroid mediated signaling pathway	IEP	HCCA
BP	GO:0009791	post-embryonic development	IEP	HCCA
BP	GO:0010193	response to ozone	IEP	HCCA
BP	GO:0010483	pollen tube reception	IEP	HCCA
BP	GO:0014070	response to organic cyclic compound	IEP	HCCA
BP	GO:0016127	sterol catabolic process	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016759	cellulose synthase activity	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
BP	GO:0019320	hexose catabolic process	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
BP	GO:0022604	regulation of cell morphogenesis	IEP	HCCA
BP	GO:0023052	signaling	IEP	HCCA
CC	GO:0030054	cell junction	IEP	HCCA
BP	GO:0030244	cellulose biosynthetic process	IEP	HCCA
BP	GO:0034434	obsolete sterol esterification	IEP	HCCA
CC	GO:0042995	cell projection	IEP	HCCA
BP	GO:0043401	steroid hormone mediated signaling pathway	IEP	HCCA
CC	GO:0043680	filiform apparatus	IEP	HCCA
BP	GO:0046365	monosaccharide catabolic process	IEP	HCCA
BP	GO:0046777	protein autophosphorylation	IEP	HCCA
BP	GO:0051274	beta-glucan biosynthetic process	IEP	HCCA
BP	GO:0051510	regulation of unidimensional cell growth	IEP	HCCA
BP	GO:0051703	biological process involved in intraspecies interaction between organisms	IEP	HCCA
CC	GO:0070161	anchoring junction	IEP	HCCA
CC	GO:0090406	pollen tube	IEP	HCCA
CC	GO:0120025	plasma membrane bounded cell projection	IEP	HCCA
BP	GO:1901616	organic hydroxy compound catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR030395	GP_PDE_dom	367	654

External Links

No external refs found!

AT4G26690 (GPDL2, SHV3, MRH5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation