Heatmap: Cluster_106 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
-0.46 0.24 -1.63 -1.55 -1.0 -0.97 -1.27 -7.43 -6.43 -6.98 -7.08 -7.53 -9.32 0.05 0.23 0.11 1.65 0.75 -1.73 0.4 0.34 0.29 0.56 0.09 -2.71 0.51 -0.77 -0.01 2.16 -3.56 -0.29 0.07 0.27 0.58 0.14 0.65 0.02 0.3 -0.04 -1.36 -3.06 -0.14 1.03 -0.49 0.38 2.04 -0.44 -0.4
AT1G04240 (IAA3)
-3.74 -0.28 -3.98 -4.85 -4.11 -5.14 -5.41 -7.92 - -8.94 -6.51 -6.22 - -0.17 -0.44 1.13 1.1 1.04 -3.02 0.55 -0.95 0.93 0.53 1.67 -6.71 2.02 -3.57 -4.96 -6.81 -4.93 -0.07 0.3 0.79 2.4 -1.25 2.31 0.16 1.09 1.87 -6.02 - 0.73 0.09 -3.29 0.58 -4.92 -11.43 -3.19
-3.35 0.84 -1.0 -3.14 -1.53 -4.59 -2.94 - - -11.24 - - -5.9 -0.18 0.2 -0.11 1.38 0.91 -0.16 1.12 -0.02 -0.04 0.32 0.1 -2.96 -0.09 0.76 1.16 -1.26 -6.48 0.82 -0.79 0.53 0.56 0.35 0.56 -1.04 0.18 1.05 -3.82 - 0.4 0.47 -0.61 0.11 2.87 -0.9 -0.51
AT1G10550 (XET)
-3.09 -0.78 - - -4.38 -6.88 -6.05 - - - - -4.77 -6.05 -1.8 -1.02 -6.17 -1.11 1.0 -2.76 -0.06 4.09 -6.72 - -1.43 -4.24 -1.81 -1.49 -5.85 -0.85 -9.29 0.89 0.65 -0.14 2.85 -7.81 -0.8 -6.44 -0.09 -1.16 - - 1.73 0.73 - 2.49 - - -5.0
AT1G24170 (LGT9)
-0.62 0.36 -3.77 -4.85 -3.78 -4.53 -5.3 -7.75 -9.89 -8.87 -10.6 -11.16 -0.38 -0.56 -0.2 0.05 1.09 1.15 -2.0 0.17 -0.15 -0.23 -0.34 0.71 -4.78 0.51 -1.85 -1.14 -0.79 -8.02 0.5 -0.08 0.1 0.97 -0.36 1.22 -0.72 -0.28 -0.3 -2.7 -3.13 1.4 1.3 -2.25 0.56 3.27 0.64 -0.39
AT1G49780 (PUB26)
0.51 0.39 0.11 -1.33 -0.65 -1.02 -1.54 -2.07 -4.01 -3.64 -4.08 -2.43 -2.58 0.45 -0.45 0.75 0.64 0.85 -0.69 1.31 -0.25 -0.29 -0.14 1.26 -0.55 1.63 -0.38 1.33 -1.19 -1.02 0.92 -0.2 0.31 -0.09 0.3 0.07 0.33 0.02 0.62 -3.6 -4.39 0.73 0.42 0.29 0.74 -0.34 - -1.07
AT1G70090 (LGT8)
1.08 1.32 -0.08 0.09 -0.1 -1.41 0.01 -7.23 -7.46 -7.11 -7.07 -6.81 -7.85 -0.35 0.13 0.57 1.27 0.63 -1.69 1.74 -1.11 0.37 0.64 0.25 -2.58 0.4 -0.26 0.08 1.0 -6.7 0.28 -0.88 -0.14 -0.2 0.58 1.6 -0.45 0.01 1.3 -0.93 -1.09 -1.78 -0.63 -1.07 -1.09 -0.47 0.76 -0.74
-2.55 -1.79 - -8.09 -6.51 - - - - -9.53 - - - -2.67 -2.86 -0.3 -0.89 0.66 -2.64 -0.1 -3.05 -3.95 -4.97 0.85 1.76 1.16 -0.13 -0.3 -0.0 -0.05 -1.1 1.14 1.26 1.88 -3.18 0.01 1.04 0.68 1.74 -3.38 -6.18 3.02 1.98 -5.19 1.41 - - -3.18
AT2G17230 (EXL5)
-3.74 1.03 -4.4 -4.68 -3.91 -5.26 -5.26 -9.4 -7.29 -10.54 -7.9 -6.95 - 0.74 0.52 0.16 1.23 0.9 -1.04 1.0 -1.64 1.79 1.41 0.92 -0.27 0.45 -2.88 -0.05 -1.15 -3.08 0.5 2.02 0.9 1.14 0.98 1.89 -1.21 1.44 0.78 -9.66 - -3.33 -1.87 -0.22 -0.37 -8.43 - -1.21
0.9 0.03 -1.41 -1.85 -0.45 -0.65 -0.62 -1.59 -1.47 -0.6 -1.15 -0.68 -4.37 -0.83 -1.39 0.61 0.2 -0.53 0.26 0.3 -0.69 -0.73 -0.93 0.13 -0.82 0.27 1.03 -0.06 0.77 -1.35 -0.5 0.29 0.35 0.96 -1.07 0.51 1.68 -0.04 2.13 -6.33 -1.86 2.25 0.16 -0.84 -0.05 - -7.97 -1.84
AT2G23130 (AGP17)
-2.3 0.17 1.65 1.86 1.82 1.52 1.9 -3.33 -3.33 -5.23 -4.18 - -5.83 -0.53 0.38 -1.21 -1.23 -0.38 -1.29 -0.73 -3.93 0.24 0.2 1.82 -3.39 1.97 -1.26 -2.46 -0.31 -7.77 1.47 -1.57 2.2 -0.57 -2.85 0.28 -7.47 -0.0 0.6 -7.26 -6.29 -2.21 -0.33 -7.63 -3.4 - - -3.08
-2.63 1.8 -6.37 -6.39 -4.89 -5.53 -7.34 -9.24 - -7.87 - - -2.35 0.93 1.92 1.01 -2.11 -2.04 -1.42 2.2 -0.04 1.66 1.78 0.86 -4.18 1.43 -0.93 -0.81 -1.47 -7.31 0.64 -0.12 1.87 -0.4 1.51 0.79 -0.69 0.89 1.19 -2.16 -2.59 -0.94 -4.6 -5.0 -3.07 - -10.53 -6.5
-3.95 0.74 -0.63 1.76 0.79 0.99 1.69 -2.32 -2.87 -5.73 -6.17 - -4.49 0.03 -0.15 0.75 0.81 -0.5 -3.67 0.32 -2.98 0.25 -0.33 1.0 -5.49 1.17 -2.11 -1.72 -0.88 -4.65 -0.59 -0.66 -0.01 0.84 -0.74 0.66 -2.51 -0.05 -0.65 -6.09 -6.7 1.5 2.43 -3.13 1.16 -1.24 -10.61 -0.12
AT2G46330 (AGP16)
0.8 1.05 0.27 -0.23 -0.09 -0.38 -0.93 -1.14 -2.66 -5.06 -5.27 -3.98 -2.45 -0.36 -1.88 -0.63 1.17 0.19 -2.07 -0.65 0.53 -1.44 -0.79 -0.65 -6.14 -0.58 -2.92 -0.49 -1.94 -6.12 -0.16 -0.76 1.03 1.48 -0.8 -0.07 -1.54 0.07 -0.11 -1.19 0.81 1.41 2.32 0.7 0.4 1.28 -1.01 1.21
-0.68 1.33 -4.39 -5.03 -3.52 -3.54 -4.16 -4.76 -5.73 -7.96 -6.59 - -4.09 -0.08 0.4 0.23 2.3 2.17 -2.45 0.65 0.01 -0.15 0.11 0.64 -4.18 0.42 -1.53 -0.21 0.59 -5.07 0.8 -0.25 1.07 1.74 -0.41 0.44 -1.31 -0.06 0.85 -4.02 -2.66 -1.39 1.17 -0.35 0.4 0.46 -0.68 -0.18
-3.29 -4.44 -5.0 -4.74 -4.7 - -5.9 - - -8.39 - - -1.18 -0.74 -3.68 -1.37 -4.34 -1.52 -5.64 -3.17 1.1 -3.28 -5.09 -1.23 -4.27 -0.8 -1.58 - -6.45 -5.95 -3.55 0.14 0.96 2.35 -2.3 0.02 1.8 0.13 2.07 -5.71 - 3.53 2.47 -1.43 1.66 - 1.29 -0.41
-3.72 -0.15 -3.19 -3.26 -3.23 -3.15 -3.96 -8.12 -8.22 -8.35 -8.32 -8.18 -0.04 -0.26 0.06 0.57 1.86 2.65 -2.02 0.01 -1.14 0.62 0.55 0.47 -3.32 0.98 -0.25 -1.79 -2.31 -7.61 -0.55 -0.18 0.64 1.78 -0.62 1.29 0.0 0.31 1.16 -4.15 -4.61 0.13 1.77 -2.09 0.83 0.16 -12.87 -0.15
-0.84 -1.22 -1.93 -2.45 -1.74 -1.24 -2.11 0.15 1.04 0.39 0.96 -4.38 2.47 -0.83 1.43 -0.14 1.5 1.73 -0.02 -0.84 -1.0 -0.35 -0.45 -0.02 -2.65 0.11 0.0 -1.91 -3.13 -6.2 -1.08 -0.37 0.75 1.29 -1.65 0.31 -0.32 -0.42 0.78 -5.4 -5.34 -0.14 1.02 -3.25 0.67 -1.23 -5.59 -0.32
-0.56 0.44 -7.5 -6.62 -6.06 -7.69 -8.35 - -10.81 -10.82 -9.58 - - -1.82 -0.56 0.92 -0.45 -0.79 -0.44 1.34 0.23 -1.55 -0.4 0.71 -5.25 0.62 -6.39 -1.54 -5.07 -7.38 0.66 1.13 1.25 1.77 -0.66 0.43 -6.36 -0.27 1.38 1.69 -3.42 -0.74 2.15 0.35 2.43 -5.73 -14.16 1.36
AT3G11700 (FLA18)
-1.78 -0.15 -4.77 -4.47 -3.87 -2.88 -3.54 -4.66 -4.71 -4.95 -4.77 -7.31 -1.39 -0.44 -0.22 0.46 1.76 1.71 -2.24 0.19 -0.22 0.19 -0.09 0.93 -3.25 0.86 -2.26 0.09 0.2 -5.85 0.19 0.0 0.75 1.24 -0.75 1.33 -1.51 0.16 0.22 -2.95 -3.38 0.94 1.44 -1.31 0.68 2.53 -2.04 -0.16
AT3G19380 (PUB25)
-1.55 0.05 -1.17 -0.78 -0.49 -0.98 -1.16 -2.86 -4.78 -4.03 -3.84 -4.65 -1.68 0.43 -0.34 0.82 -0.26 1.0 -1.29 0.13 -0.87 -0.89 -1.3 1.08 -1.33 1.38 0.51 -0.94 -0.3 -1.77 -0.54 -0.98 1.0 0.55 -1.03 1.19 0.79 0.14 2.46 -6.11 -4.7 1.0 0.66 0.29 0.8 1.18 -2.58 -0.78
0.55 -0.55 -6.35 -6.86 -3.51 -1.86 -10.34 -3.85 -9.73 -7.54 -8.42 -8.55 -4.47 -0.49 -2.36 -1.01 0.38 0.93 -3.06 -1.13 -3.08 -0.68 -0.55 0.11 -0.55 0.45 -0.75 -1.51 -2.7 -5.42 -0.59 -0.58 0.14 0.64 -1.3 1.15 1.49 0.13 3.09 -4.77 -5.12 -1.0 0.4 -1.86 0.46 3.39 -0.4 -0.63
AT3G28180 (CSLC4)
-2.18 -1.96 -9.5 -8.2 -8.4 -7.06 -9.73 -9.38 -10.14 -11.11 - - -12.05 -0.97 0.52 0.03 2.22 2.81 -3.11 -2.5 -2.71 -0.49 -1.1 0.81 -4.8 1.11 -1.9 -6.33 -1.34 -7.16 -2.75 -0.33 0.15 1.8 -4.49 1.42 1.02 0.13 -0.7 -0.86 0.31 -0.36 1.46 -1.78 1.16 2.5 -3.4 0.08
-2.54 -0.22 -8.55 -8.89 -3.94 -4.63 -6.87 -9.46 - -11.28 - - - -0.33 -1.42 -2.03 1.06 2.95 -2.85 -0.96 -2.64 -1.38 -0.48 0.57 -2.67 0.22 -1.55 -1.08 -3.69 -4.1 0.33 0.39 0.93 1.82 0.27 0.79 0.43 0.16 0.61 -3.67 -1.39 0.05 2.23 1.0 1.92 -2.51 -0.42 1.11
-0.4 1.07 - - -2.96 - - - - - - - - -2.4 0.2 - 1.85 - - 0.78 - - 1.06 0.82 - 1.58 - - -4.25 - -2.53 -2.65 -2.83 2.0 -5.27 -0.86 - 0.79 -2.72 - - 3.3 3.11 - 2.17 - - 0.63
-0.93 1.07 -2.45 -2.35 -2.31 -3.9 -2.3 - -10.07 -8.76 -9.16 - -9.55 0.95 0.69 0.72 0.56 0.34 -1.33 0.94 -0.03 0.63 0.76 0.54 -0.62 0.73 -1.45 -0.1 0.42 -1.25 0.29 0.46 1.34 1.35 0.49 1.04 0.83 1.01 1.24 -1.86 -3.01 -0.79 0.18 -0.0 0.27 -0.16 -12.62 -0.36
AT4G02130 (LGT10)
-3.34 1.01 -9.9 -7.38 -8.72 -6.91 -10.06 - - - - - -7.72 -0.02 -0.16 0.57 1.98 2.06 -3.83 1.26 -2.49 0.72 1.68 -0.29 -5.51 0.14 -3.35 -0.15 -2.09 -9.09 0.39 -1.1 0.23 -0.11 0.93 1.39 -4.21 0.46 -0.71 -3.32 -7.28 -1.17 0.4 -0.35 0.35 3.05 -2.61 -0.16
AT4G02330 (ATPMEPCRB)
-2.77 0.69 -3.88 -2.64 -6.62 -6.13 -3.72 -5.97 - -10.04 -5.86 -7.33 - 1.45 0.47 1.42 -5.26 -3.89 -3.15 1.45 3.06 -0.49 1.05 -1.41 -6.54 -2.28 -3.9 -1.03 -4.07 -9.23 0.02 0.97 1.59 2.66 -0.24 0.94 0.18 0.93 -1.47 -4.61 -4.37 1.0 0.13 -6.2 1.03 - - -3.59
-3.61 -0.5 -4.06 -4.06 -3.1 -3.77 -3.51 -11.0 -9.12 -8.92 -7.96 - -8.87 -0.98 -1.14 0.69 1.39 1.23 -1.56 0.26 0.15 -1.1 -1.96 0.94 -2.25 1.28 -0.2 -0.66 2.16 -4.77 -0.33 -0.57 1.1 1.53 -1.49 1.93 0.34 0.46 2.47 -1.52 -0.11 0.93 0.75 -4.97 0.09 -3.31 -3.46 -1.51
AT4G15800 (RALFL33)
-1.49 -0.68 -7.41 - -6.64 -6.46 -6.62 -6.16 -7.62 -6.63 -8.05 -2.23 -4.2 -0.53 -0.4 1.13 1.69 1.78 -1.17 0.05 1.54 -0.24 -1.04 0.9 -0.79 1.29 1.59 -0.21 -2.88 -3.7 -0.2 -0.23 0.68 1.57 -1.76 0.68 0.23 -0.1 1.38 -4.33 -4.53 1.69 1.35 -2.88 0.33 -0.75 -1.53 -0.75
0.55 0.76 -3.92 -5.53 -3.92 -5.51 -5.48 - - -7.89 -7.59 - - -0.75 -2.67 -0.38 1.03 1.85 -1.59 0.85 0.91 -0.92 -0.17 0.73 -2.0 0.31 -1.8 1.31 -0.63 -2.63 0.71 0.01 0.54 1.02 -0.07 1.47 -0.01 0.71 0.95 -7.36 -3.07 2.35 1.47 -1.48 0.04 -0.91 -8.99 -0.01
-1.2 0.49 -2.13 -1.79 -1.35 -0.4 -1.59 1.1 0.55 -2.16 -1.33 0.26 -1.82 0.12 0.25 0.2 0.3 0.52 -0.8 0.32 1.0 0.21 0.43 0.51 -2.47 0.85 -0.51 -0.37 -0.45 -3.7 0.12 -0.19 -0.27 0.19 -0.26 1.04 0.53 0.58 0.31 -4.04 -0.16 0.81 1.09 -0.11 0.86 -0.42 -5.04 -0.02
-0.48 -0.06 -0.53 -0.87 -0.18 0.49 -0.62 -0.07 -0.93 -2.95 -2.69 -4.68 -2.91 -0.62 -0.2 0.27 1.42 1.63 -1.19 -0.08 0.58 -0.74 -0.3 0.63 -1.77 0.93 0.54 -0.69 -2.1 -2.27 -0.19 -0.2 -0.42 0.69 -0.79 0.78 0.49 -0.02 0.81 -2.92 -2.72 0.21 1.55 -0.53 1.16 -0.05 0.29 0.16
AT4G26690 (SHV3)
-2.01 -1.12 -4.78 -4.83 -4.48 -4.11 -4.82 -8.87 -9.47 -10.29 -9.74 -12.02 -8.21 -0.41 -1.05 -0.53 0.86 1.02 -1.97 -0.53 -0.02 -0.4 -0.37 0.38 -2.81 0.67 0.89 -0.1 -1.16 -5.55 -0.79 -0.2 0.07 1.69 -0.74 0.73 1.06 0.38 2.36 -0.6 -0.2 2.48 0.96 -2.89 1.48 0.51 0.16 -0.99
AT4G30440 (GAE1)
-0.69 -0.76 -4.55 -5.84 -4.71 -4.27 -6.06 -0.53 0.3 0.45 0.32 -5.49 0.78 -0.69 -0.95 0.78 1.82 1.47 0.36 0.28 -0.52 -0.29 -0.38 1.12 -1.27 1.55 0.27 -0.73 -0.07 -3.9 -1.31 -0.68 -0.6 0.09 -1.32 0.59 1.77 0.24 0.77 -2.05 -1.02 0.39 0.39 -2.92 -0.26 0.64 -0.24 -1.4
-0.45 0.02 -5.3 -6.88 -3.92 -3.67 -6.81 -7.85 - -10.06 - - -7.69 0.07 -1.45 -0.64 1.8 1.94 -2.45 -0.6 -0.91 0.12 0.31 1.27 -5.38 1.51 -1.82 -1.83 -2.05 -7.44 -0.25 -0.52 -0.08 1.49 -0.29 1.51 -2.7 0.58 -1.29 -0.15 -3.65 0.91 2.08 -0.74 1.17 2.13 -1.6 0.34
-2.21 -0.14 -9.53 -7.48 -6.5 - -7.35 - - - - - - -0.06 -1.69 -0.06 -0.24 0.73 -2.05 1.02 -1.89 0.77 1.38 1.07 -3.35 1.41 -0.57 0.67 -4.38 -4.43 1.61 -0.31 1.19 0.79 1.22 2.13 1.15 0.46 0.78 -3.07 -5.74 0.47 1.48 -2.04 0.88 -2.47 0.11 -1.0
-0.15 -1.44 0.17 -0.08 0.05 0.02 0.02 -0.2 -0.2 -1.22 -0.84 -6.83 0.23 -0.21 -0.04 0.59 0.05 0.46 0.0 0.64 -1.27 -0.21 -1.66 1.53 -3.25 1.9 0.07 -2.46 -1.56 -7.81 -1.94 -2.17 0.47 -1.44 -2.39 3.08 1.59 0.97 1.08 -2.36 -3.48 -1.61 -2.88 -6.56 -2.71 - -0.88 -6.33
AT5G54380 (THE1)
-2.81 0.73 -4.73 -4.61 -6.03 -6.52 -4.82 - -10.46 - - -11.52 - 0.09 0.66 0.86 1.83 1.82 -1.81 0.25 0.09 -0.07 -0.2 1.13 -3.94 1.26 -0.26 -0.64 -1.01 -7.29 0.22 -0.31 -0.08 1.21 -0.4 1.14 0.18 -0.06 0.34 -4.64 -5.95 -0.06 2.08 -0.93 1.36 1.21 -2.05 0.12
AT5G56170 (LLG1)
-0.23 0.76 -6.86 -8.0 -4.6 -5.63 -6.79 -6.34 -6.59 -5.17 -5.58 -10.58 -5.12 -0.07 -0.92 -0.16 0.8 0.81 -2.23 0.36 0.55 -0.51 -0.27 0.23 -1.32 0.21 0.34 -0.26 -2.67 -1.62 0.41 0.27 0.0 1.34 -0.08 0.59 0.02 0.22 1.23 -2.03 -0.88 1.93 1.72 -0.5 0.95 1.72 0.87 -0.12
0.1 -1.2 -1.76 -3.49 -2.09 -4.52 -2.59 -5.88 -6.47 -8.12 -5.97 - -1.12 -0.21 -0.92 -0.04 0.99 1.01 -2.25 -1.26 -1.91 -2.05 -2.96 -0.7 -1.44 -0.84 0.57 -0.68 -2.25 -2.4 -1.71 -0.77 0.23 1.76 -1.85 0.08 1.65 -0.2 2.71 -5.5 -0.7 1.62 1.9 -0.77 1.19 2.01 -0.13 -0.2
AT5G66200 (ARO2)
0.71 0.81 -0.78 -2.57 -1.87 -4.11 -2.44 -6.63 -7.16 -6.34 -6.78 -1.34 -5.22 0.1 -0.48 0.24 0.49 1.21 -1.06 0.44 0.41 -0.56 -0.34 -0.04 -2.69 0.33 0.03 0.4 -0.19 -4.5 0.05 -0.19 0.82 1.29 0.13 -0.01 0.47 0.59 1.99 -1.99 -0.37 1.07 1.03 -0.1 0.5 -0.52 0.84 -0.24

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.