AT4G21980 (ATG8A, APG8A)

Aliases : ATG8A, APG8A

Description : Ubiquitin-like superfamily protein

Gene families : OG0000801 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000801_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G21980

Target	Alias	Description	ECC score	Gene Family Method
Ala_g00202	ATG8F	autophagosome ubiquitin-fold protein *(ATG8) & original...	0.04	OrthoFinder output from all 47 species
Aspi01Gene71943.t1	ATG8F, Aspi01Gene71943	autophagosome ubiquitin-fold protein *(ATG8) & original...	0.03	OrthoFinder output from all 47 species
LOC_Os07g32800.2	ATG8C, LOC_Os07g32800	ATG8 autophagosome ubiquitin-fold protein	0.02	OrthoFinder output from all 47 species
Len_g16864	ATG8F	autophagosome ubiquitin-fold protein *(ATG8) & original...	0.03	OrthoFinder output from all 47 species
Len_g26188	ATG8F	autophagosome ubiquitin-fold protein *(ATG8) & original...	0.04	OrthoFinder output from all 47 species
Lfl_g30636	ATG8F	autophagosome ubiquitin-fold protein *(ATG8) & original...	0.02	OrthoFinder output from all 47 species
Sam_g36881	No alias	autophagosome ubiquitin-fold protein *(ATG8) & original...	0.02	OrthoFinder output from all 47 species
Sam_g39855	No alias	autophagosome ubiquitin-fold protein *(ATG8) & original...	0.03	OrthoFinder output from all 47 species
Solyc08g078820.3.1	ATG8F, Solyc08g078820	ATG8 autophagosome ubiquitin-fold protein	0.06	OrthoFinder output from all 47 species
Spa_g01434	ATG8G	autophagosome ubiquitin-fold protein *(ATG8) & original...	0.02	OrthoFinder output from all 47 species
Spa_g25476	ATG8D	autophagosome ubiquitin-fold protein *(ATG8) & original...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IDA	Interproscan
CC	GO:0005737	cytoplasm	NAS	Interproscan
CC	GO:0005773	vacuole	None	Extended
CC	GO:0005775	vacuolar lumen	NAS	Interproscan
CC	GO:0005776	autophagosome	IDA	Interproscan
BP	GO:0006914	autophagy	ISS	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009408	response to heat	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009620	response to fungus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010286	heat acclimation	RCA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	None	Extended
MF	GO:0019776	Atg8 ligase activity	ISS	Interproscan
MF	GO:0019779	Atg8 activating enzyme activity	ISS	Interproscan
MF	GO:0019783	ubiquitin-like protein peptidase activity	None	Extended
MF	GO:0019786	Atg8-specific peptidase activity	ISS	Interproscan
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
CC	GO:0031974	membrane-enclosed lumen	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043233	organelle lumen	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0050832	defense response to fungus	IEP	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0061919	process utilizing autophagic mechanism	None	Extended
CC	GO:0070013	intracellular organelle lumen	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003978	UDP-glucose 4-epimerase activity	IEP	HCCA
MF	GO:0003988	acetyl-CoA C-acyltransferase activity	IEP	HCCA
MF	GO:0004462	lactoylglutathione lyase activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
CC	GO:0005739	mitochondrion	IEP	HCCA
CC	GO:0005777	peroxisome	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0006635	fatty acid beta-oxidation	IEP	HCCA
BP	GO:0007031	peroxisome organization	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0009062	fatty acid catabolic process	IEP	HCCA
BP	GO:0009404	toxin metabolic process	IEP	HCCA
BP	GO:0009407	toxin catabolic process	IEP	HCCA
BP	GO:0009694	jasmonic acid metabolic process	IEP	HCCA
BP	GO:0009695	jasmonic acid biosynthetic process	IEP	HCCA
BP	GO:0009744	response to sucrose	IEP	HCCA
BP	GO:0009746	response to hexose	IEP	HCCA
BP	GO:0009750	response to fructose	IEP	HCCA
BP	GO:0009787	regulation of abscisic acid-activated signaling pathway	IEP	HCCA
BP	GO:0009789	positive regulation of abscisic acid-activated signaling pathway	IEP	HCCA
BP	GO:0009966	regulation of signal transduction	IEP	HCCA
BP	GO:0009967	positive regulation of signal transduction	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
BP	GO:0010039	response to iron ion	IEP	HCCA
BP	GO:0010053	root epidermal cell differentiation	IEP	HCCA
BP	GO:0010111	glyoxysome organization	IEP	HCCA
BP	GO:0010498	proteasomal protein catabolic process	IEP	HCCA
BP	GO:0010583	response to cyclopentenone	IEP	HCCA
BP	GO:0010646	regulation of cell communication	IEP	HCCA
BP	GO:0010647	positive regulation of cell communication	IEP	HCCA
MF	GO:0016408	C-acyltransferase activity	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0016846	carbon-sulfur lyase activity	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016854	racemase and epimerase activity	IEP	HCCA
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	HCCA
BP	GO:0019395	fatty acid oxidation	IEP	HCCA
BP	GO:0019748	secondary metabolic process	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
BP	GO:0023051	regulation of signaling	IEP	HCCA
BP	GO:0023056	positive regulation of signaling	IEP	HCCA
BP	GO:0030258	lipid modification	IEP	HCCA
CC	GO:0031371	ubiquitin conjugating enzyme complex	IEP	HCCA
CC	GO:0031372	UBC13-MMS2 complex	IEP	HCCA
BP	GO:0034284	response to monosaccharide	IEP	HCCA
BP	GO:0034285	response to disaccharide	IEP	HCCA
BP	GO:0034440	lipid oxidation	IEP	HCCA
BP	GO:0035966	response to topologically incorrect protein	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
CC	GO:0042579	microbody	IEP	HCCA
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0043248	proteasome assembly	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0045036	protein targeting to chloroplast	IEP	HCCA
BP	GO:0045037	protein import into chloroplast stroma	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
BP	GO:0048584	positive regulation of response to stimulus	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:0051788	response to misfolded protein	IEP	HCCA
BP	GO:0065002	intracellular protein transmembrane transport	IEP	HCCA
BP	GO:0071806	protein transmembrane transport	IEP	HCCA
BP	GO:0072329	monocarboxylic acid catabolic process	IEP	HCCA
BP	GO:0072596	establishment of protein localization to chloroplast	IEP	HCCA
BP	GO:0072598	protein localization to chloroplast	IEP	HCCA
BP	GO:0080129	proteasome core complex assembly	IEP	HCCA
BP	GO:0090627	plant epidermal cell differentiation	IEP	HCCA
BP	GO:0098754	detoxification	IEP	HCCA
BP	GO:1901419	regulation of response to alcohol	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA
BP	GO:1905957	regulation of cellular response to alcohol	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004241	Atg8-like	15	117

External Links

No external refs found!

AT4G21980 (ATG8A, APG8A)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation