AT4G11640 (ATSR, SR)

Aliases : ATSR, SR

Description : serine racemase

Gene families : OG0004131 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004131_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G11640
Cluster	HCCA: Cluster_103

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003941	L-serine ammonia-lyase activity	IDA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006563	L-serine metabolic process	IDA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008721	D-serine ammonia-lyase activity	IDA	Interproscan
BP	GO:0009069	serine family amino acid metabolic process	IDA	Interproscan
BP	GO:0009069	serine family amino acid metabolic process	ISS	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016840	carbon-nitrogen lyase activity	None	Extended
MF	GO:0016841	ammonia-lyase activity	None	Extended
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016854	racemase and epimerase activity	None	Extended
MF	GO:0016855	racemase and epimerase activity, acting on amino acids and derivatives	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0030378	serine racemase activity	IDA	Interproscan
MF	GO:0030378	serine racemase activity	ISS	Interproscan
MF	GO:0036361	racemase activity, acting on amino acids and derivatives	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046416	D-amino acid metabolic process	None	Extended
MF	GO:0047661	amino-acid racemase activity	None	Extended
BP	GO:0070178	D-serine metabolic process	IDA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000064	L-ornithine transmembrane transporter activity	IEP	HCCA
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
MF	GO:0004519	endonuclease activity	IEP	HCCA
MF	GO:0004521	endoribonuclease activity	IEP	HCCA
MF	GO:0004540	ribonuclease activity	IEP	HCCA
MF	GO:0005290	L-histidine transmembrane transporter activity	IEP	HCCA
MF	GO:0005342	organic acid transmembrane transporter activity	IEP	HCCA
CC	GO:0005743	mitochondrial inner membrane	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0008033	tRNA processing	IEP	HCCA
MF	GO:0008514	organic anion transmembrane transporter activity	IEP	HCCA
MF	GO:0015171	amino acid transmembrane transporter activity	IEP	HCCA
MF	GO:0015173	aromatic amino acid transmembrane transporter activity	IEP	HCCA
MF	GO:0015174	basic amino acid transmembrane transporter activity	IEP	HCCA
MF	GO:0015179	L-amino acid transmembrane transporter activity	IEP	HCCA
MF	GO:0015189	L-lysine transmembrane transporter activity	IEP	HCCA
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	HCCA
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	HCCA
BP	GO:0031123	RNA 3'-end processing	IEP	HCCA
BP	GO:0042780	tRNA 3'-end processing	IEP	HCCA
MF	GO:0042781	3'-tRNA processing endoribonuclease activity	IEP	HCCA
MF	GO:0046943	carboxylic acid transmembrane transporter activity	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:1901474	azole transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001926	TrpB-like_PALP	24	315

External Links

No external refs found!

AT4G11640 (ATSR, SR)

Expression Profile

Co-expression Networks

Functional Annotation