AT4G11070 (AtWRKY41, WRKY41)

Aliases : AtWRKY41, WRKY41

Description : WRKY family transcription factor

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G11070

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00015p00181570	WRKY6, ATWRKY6,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
AMTR_s00156p00038330	WRKY9, ATWRKY9,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
AT1G66550	WRKY67, ATWRKY67	WRKY DNA-binding protein 67	0.03	OrthoFinder output from all 47 species
AT1G66600	ABO3, WRKY63, ATWRKY63	ABA overly sensitive mutant 3	0.03	OrthoFinder output from all 47 species
AT1G68150	WRKY9, ATWRKY9	WRKY DNA-binding protein 9	0.03	OrthoFinder output from all 47 species
AT1G69810	WRKY36, ATWRKY36	WRKY DNA-binding protein 36	0.04	OrthoFinder output from all 47 species
AT1G80590	WRKY66, ATWRKY66	WRKY DNA-binding protein 66	0.03	OrthoFinder output from all 47 species
AT1G80840	ATWRKY40, WRKY40	WRKY DNA-binding protein 40	0.03	OrthoFinder output from all 47 species
AT2G25000	ATWRKY60, WRKY60	WRKY DNA-binding protein 60	0.05	OrthoFinder output from all 47 species
AT2G30250	ATWRKY25, WRKY25	WRKY DNA-binding protein 25	0.09	OrthoFinder output from all 47 species
AT2G38470	WRKY33, ATWRKY33	WRKY DNA-binding protein 33	0.04	OrthoFinder output from all 47 species
AT2G40740	WRKY55, ATWRKY55	WRKY DNA-binding protein 55	0.05	OrthoFinder output from all 47 species
AT2G40750	WRKY54, ATWRKY54	WRKY DNA-binding protein 54	0.04	OrthoFinder output from all 47 species
AT2G47260	WRKY23, ATWRKY23	WRKY DNA-binding protein 23	0.02	OrthoFinder output from all 47 species
AT3G01080	ATWRKY58, WRKY58	WRKY DNA-binding protein 58	0.05	OrthoFinder output from all 47 species
AT3G56400	ATWRKY70, WRKY70	WRKY DNA-binding protein 70	0.05	OrthoFinder output from all 47 species
AT4G31800	WRKY18, ATWRKY18	WRKY DNA-binding protein 18	0.11	OrthoFinder output from all 47 species
AT5G15130	WRKY72, ATWRKY72	WRKY DNA-binding protein 72	0.03	OrthoFinder output from all 47 species
AT5G22570	WRKY38, ATWRKY38	WRKY DNA-binding protein 38	0.05	OrthoFinder output from all 47 species
AT5G64810	ATWRKY51, WRKY51	WRKY DNA-binding protein 51	0.03	OrthoFinder output from all 47 species
Adi_g058461	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g49345	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g21159	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g57699	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene39448.t1	WRKY3, Aspi01Gene39448	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene52920.t1	ATWRKY71,...	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene64694.t1	WRKY6, ATWRKY6,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene65370.t1	WRKY75,...	WRKY-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Cba_g25928	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.17G009500.1	ATWRKY57,...	WRKY-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Dcu_g10501	WRKY48, ATWRKY48	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01012682001	WRKY6, ATWRKY6	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01015952001	ATWRKY40, WRKY40	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01019511001	WRKY53, ATWRKY53	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01024624001	WRKY33, ATWRKY33	RNA biosynthesis.transcriptional activation.WRKY...	0.04	OrthoFinder output from all 47 species
GSVIVT01027069001	WRKY53, ATWRKY53	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01035885001	ATWRKY40, WRKY40	RNA biosynthesis.transcriptional activation.WRKY...	0.04	OrthoFinder output from all 47 species
Gb_00544	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Gb_00546	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Gb_00547	AtWRKY41, WRKY41	transcription factor (WRKY)	0.05	OrthoFinder output from all 47 species
Gb_01873	ATWRKY71, WRKY71	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Gb_07810	WRKY6, ATWRKY6	transcription factor (WRKY)	0.05	OrthoFinder output from all 47 species
LOC_Os01g61080.1	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.04	OrthoFinder output from all 47 species
LOC_Os02g08440.1	ATWRKY40,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os03g21710.1	ATWRKY70,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os05g25770.1	WRKY55,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
LOC_Os05g27730.1	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.02	OrthoFinder output from all 47 species
LOC_Os05g40070.1	ATWRKY64,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os05g46020.1	ATWRKY50,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
LOC_Os09g25060.1	ATWRKY40,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os09g25070.1	ATWRKY40,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Len_g46515	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_310991g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_53351g0010	WRKY2, ATWRKY2	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
MA_8979233g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Msp_g06292	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g35201	WRKY46, ATWRKY46	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g34154	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g34445	ATWRKY50, WRKY50	WRKY-type transcription factor & original description: none	0.07	OrthoFinder output from all 47 species
Pnu_g05849	WRKY43, ATWRKY43	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006969	WRKY6, ATWRKY6	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014708	WRKY1, ZAP1, ATWRKY1	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0216.g026051	WRKY42, AtWRKY42	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Solyc01g095630.3.1	AtWRKY41,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc02g032950.3.1	WRKY6, ATWRKY6,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc02g067430.3.1	WRKY72,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Solyc03g007380.2.1	AtWRKY41,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc03g095770.3.1	ATWRKY70,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Solyc06g066370.4.1	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.04	OrthoFinder output from all 47 species
Solyc06g068460.3.1	ATWRKY40,...	transcription factor (WRKY)	0.05	OrthoFinder output from all 47 species
Solyc08g008280.3.1	WRKY53,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Solyc09g014990.4.1	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.03	OrthoFinder output from all 47 species
Solyc10g009550.3.1	ATWRKY30,...	transcription factor (WRKY)	0.06	OrthoFinder output from all 47 species
Solyc10g019160.2.1	WRKY26, Solyc10g019160	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Solyc12g056745.1.1	ATWRKY51,...	transcription factor (WRKY)	0.05	OrthoFinder output from all 47 species
Spa_g51513	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g55223	ATWRKY50, WRKY50	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g08676	WRKY2, ATWRKY2	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g13035	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g14392	ATWRKY45, WRKY45	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g20270	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g37460	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e009708_P001	WRKY53,...	transcription factor (WRKY)	0.05	OrthoFinder output from all 47 species
Zm00001e023991_P001	ATWRKY30,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e031518_P004	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.04	OrthoFinder output from all 47 species
Zm00001e036514_P001	WRKY72,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000165	MAPK cascade	IEP	HCCA
BP	GO:0001666	response to hypoxia	IEP	HCCA
BP	GO:0002237	response to molecule of bacterial origin	IEP	HCCA
BP	GO:0002376	immune system process	IEP	HCCA
BP	GO:0002682	regulation of immune system process	IEP	HCCA
BP	GO:0002831	regulation of response to biotic stimulus	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005516	calmodulin binding	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006612	protein targeting to membrane	IEP	HCCA
BP	GO:0006955	immune response	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009409	response to cold	IEP	HCCA
BP	GO:0009595	detection of biotic stimulus	IEP	HCCA
BP	GO:0009617	response to bacterium	IEP	HCCA
BP	GO:0009620	response to fungus	IEP	HCCA
BP	GO:0009627	systemic acquired resistance	IEP	HCCA
BP	GO:0009692	ethylene metabolic process	IEP	HCCA
BP	GO:0009693	ethylene biosynthetic process	IEP	HCCA
BP	GO:0009696	salicylic acid metabolic process	IEP	HCCA
BP	GO:0009697	salicylic acid biosynthetic process	IEP	HCCA
BP	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009863	salicylic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009867	jasmonic acid mediated signaling pathway	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
BP	GO:0010112	regulation of systemic acquired resistance	IEP	HCCA
BP	GO:0010200	response to chitin	IEP	HCCA
BP	GO:0010243	response to organonitrogen compound	IEP	HCCA
BP	GO:0010310	regulation of hydrogen peroxide metabolic process	IEP	HCCA
BP	GO:0010337	regulation of salicylic acid metabolic process	IEP	HCCA
BP	GO:0010363	regulation of plant-type hypersensitive response	IEP	HCCA
BP	GO:0010565	regulation of cellular ketone metabolic process	IEP	HCCA
BP	GO:0010941	regulation of cell death	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
BP	GO:0018958	phenol-containing compound metabolic process	IEP	HCCA
BP	GO:0019684	photosynthesis, light reaction	IEP	HCCA
BP	GO:0031347	regulation of defense response	IEP	HCCA
BP	GO:0031348	negative regulation of defense response	IEP	HCCA
BP	GO:0032101	regulation of response to external stimulus	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
BP	GO:0036293	response to decreased oxygen levels	IEP	HCCA
BP	GO:0036294	cellular response to decreased oxygen levels	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
BP	GO:0042537	benzene-containing compound metabolic process	IEP	HCCA
BP	GO:0042742	defense response to bacterium	IEP	HCCA
MF	GO:0042802	identical protein binding	IEP	HCCA
MF	GO:0042803	protein homodimerization activity	IEP	HCCA
BP	GO:0043067	regulation of programmed cell death	IEP	HCCA
BP	GO:0043069	negative regulation of programmed cell death	IEP	HCCA
BP	GO:0043449	cellular alkene metabolic process	IEP	HCCA
BP	GO:0043450	alkene biosynthetic process	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0043900	obsolete regulation of multi-organism process	IEP	HCCA
BP	GO:0043903	regulation of biological process involved in symbiotic interaction	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0045087	innate immune response	IEP	HCCA
BP	GO:0045088	regulation of innate immune response	IEP	HCCA
BP	GO:0046189	phenol-containing compound biosynthetic process	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
BP	GO:0048523	negative regulation of cellular process	IEP	HCCA
BP	GO:0048585	negative regulation of response to stimulus	IEP	HCCA
BP	GO:0050776	regulation of immune response	IEP	HCCA
BP	GO:0050832	defense response to fungus	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA
BP	GO:0051606	detection of stimulus	IEP	HCCA
BP	GO:0051668	localization within membrane	IEP	HCCA
BP	GO:0060548	negative regulation of cell death	IEP	HCCA
BP	GO:0062012	regulation of small molecule metabolic process	IEP	HCCA
BP	GO:0070482	response to oxygen levels	IEP	HCCA
BP	GO:0070887	cellular response to chemical stimulus	IEP	HCCA
BP	GO:0071453	cellular response to oxygen levels	IEP	HCCA
BP	GO:0071456	cellular response to hypoxia	IEP	HCCA
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0072657	protein localization to membrane	IEP	HCCA
BP	GO:0080134	regulation of response to stress	IEP	HCCA
BP	GO:0080135	regulation of cellular response to stress	IEP	HCCA
BP	GO:0080142	regulation of salicylic acid biosynthetic process	IEP	HCCA
BP	GO:0090150	establishment of protein localization to membrane	IEP	HCCA
BP	GO:0120251	hydrocarbon biosynthetic process	IEP	HCCA
BP	GO:0120252	hydrocarbon metabolic process	IEP	HCCA
BP	GO:0120254	olefinic compound metabolic process	IEP	HCCA
BP	GO:0120255	olefinic compound biosynthetic process	IEP	HCCA
BP	GO:1900673	olefin metabolic process	IEP	HCCA
BP	GO:1900674	olefin biosynthetic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA
BP	GO:1901698	response to nitrogen compound	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA
BP	GO:2000377	regulation of reactive oxygen species metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	141	200

External Links

No external refs found!

AT4G11070 (AtWRKY41, WRKY41)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation