AT4G01870

Description : tolB protein-related

Gene families : OG0001865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001865_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G01870
Cluster	HCCA: Cluster_62

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00045p00058330	evm_27.TU.AmTr_v1...	No description available	0.05	OrthoFinder output from all 47 species
AT1G21670	No alias	LOCATED IN: cell wall, plant-type cell wall; EXPRESSED...	0.04	OrthoFinder output from all 47 species
Adi_g084072	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g110373	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g02531	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g03520	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene15296.t1	Aspi01Gene15296	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene38536.t1	Aspi01Gene38536	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene50991.t1	Aspi01Gene50991	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g24094	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.03G023100.1	Ceric.03G023100	not classified & original description: pacid=50572411...	0.04	OrthoFinder output from all 47 species
Ceric.30G043000.1	Ceric.30G043000	not classified & original description: pacid=50608395...	0.01	OrthoFinder output from all 47 species
Ceric.30G043300.1	Ceric.30G043300	not classified & original description: pacid=50608139...	0.03	OrthoFinder output from all 47 species
Dcu_g01531	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Dde_g26710	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Gb_15673	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Gb_15674	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Gb_30451	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os07g44410.1	LOC_Os07g44410	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Msp_g10541	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g61810	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020500	No alias	not classified & original description: CDS=1-2115	0.03	OrthoFinder output from all 47 species
Solyc06g008620.1.1	Solyc06g008620	no hits & (original description: none)	0.09	OrthoFinder output from all 47 species
Spa_g06403	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g18912	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g08652	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e035667_P001	Zm00001e035667	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006081	cellular aldehyde metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006089	lactate metabolic process	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009404	toxin metabolic process	None	Extended
BP	GO:0009407	toxin catabolic process	RCA	Interproscan
BP	GO:0009438	methylglyoxal metabolic process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009723	response to ethylene	RCA	Interproscan
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009738	abscisic acid-activated signaling pathway	RCA	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010583	response to cyclopentenone	RCA	Interproscan
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	RCA	Interproscan
BP	GO:0019748	secondary metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0035556	intracellular signal transduction	RCA	Interproscan
BP	GO:0042180	cellular ketone metabolic process	None	Extended
BP	GO:0042182	ketone catabolic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044282	small molecule catabolic process	None	Extended
BP	GO:0046185	aldehyde catabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051596	methylglyoxal catabolic process	None	Extended
BP	GO:0061727	methylglyoxal catabolic process to lactate	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0098754	detoxification	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
BP	GO:0000303	response to superoxide	IEP	HCCA
BP	GO:0000305	response to oxygen radical	IEP	HCCA
CC	GO:0000813	ESCRT I complex	IEP	HCCA
BP	GO:0002252	immune effector process	IEP	HCCA
BP	GO:0002376	immune system process	IEP	HCCA
BP	GO:0002679	respiratory burst involved in defense response	IEP	HCCA
MF	GO:0004364	glutathione transferase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005774	vacuolar membrane	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0006631	fatty acid metabolic process	IEP	HCCA
BP	GO:0006635	fatty acid beta-oxidation	IEP	HCCA
BP	GO:0006664	glycolipid metabolic process	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006970	response to osmotic stress	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
BP	GO:0008361	regulation of cell size	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0009062	fatty acid catabolic process	IEP	HCCA
BP	GO:0009247	glycolipid biosynthetic process	IEP	HCCA
BP	GO:0009410	response to xenobiotic stimulus	IEP	HCCA
BP	GO:0009605	response to external stimulus	IEP	HCCA
BP	GO:0009620	response to fungus	IEP	HCCA
BP	GO:0009651	response to salt stress	IEP	HCCA
BP	GO:0009743	response to carbohydrate	IEP	HCCA
BP	GO:0009873	ethylene-activated signaling pathway	IEP	HCCA
BP	GO:0010200	response to chitin	IEP	HCCA
BP	GO:0010243	response to organonitrogen compound	IEP	HCCA
BP	GO:0010498	proteasomal protein catabolic process	IEP	HCCA
BP	GO:0010942	positive regulation of cell death	IEP	HCCA
BP	GO:0015711	organic anion transport	IEP	HCCA
BP	GO:0015804	neutral amino acid transport	IEP	HCCA
BP	GO:0015824	proline transport	IEP	HCCA
BP	GO:0016042	lipid catabolic process	IEP	HCCA
BP	GO:0016054	organic acid catabolic process	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
BP	GO:0019374	galactolipid metabolic process	IEP	HCCA
BP	GO:0019375	galactolipid biosynthetic process	IEP	HCCA
BP	GO:0019395	fatty acid oxidation	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
MF	GO:0019900	kinase binding	IEP	HCCA
MF	GO:0019901	protein kinase binding	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0030163	protein catabolic process	IEP	HCCA
BP	GO:0030258	lipid modification	IEP	HCCA
BP	GO:0031341	regulation of cell killing	IEP	HCCA
BP	GO:0031343	positive regulation of cell killing	IEP	HCCA
MF	GO:0031406	carboxylic acid binding	IEP	HCCA
BP	GO:0032535	regulation of cellular component size	IEP	HCCA
BP	GO:0033037	polysaccharide localization	IEP	HCCA
MF	GO:0033218	amide binding	IEP	HCCA
MF	GO:0033293	monocarboxylic acid binding	IEP	HCCA
BP	GO:0033993	response to lipid	IEP	HCCA
BP	GO:0034053	modulation by symbiont of host defense-related programmed cell death	IEP	HCCA
BP	GO:0034440	lipid oxidation	IEP	HCCA
BP	GO:0035821	modulation of process of another organism	IEP	HCCA
BP	GO:0035966	response to topologically incorrect protein	IEP	HCCA
CC	GO:0036452	ESCRT complex	IEP	HCCA
MF	GO:0042277	peptide binding	IEP	HCCA
BP	GO:0042631	cellular response to water deprivation	IEP	HCCA
BP	GO:0043068	positive regulation of programmed cell death	IEP	HCCA
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
MF	GO:0043177	organic acid binding	IEP	HCCA
BP	GO:0043248	proteasome assembly	IEP	HCCA
MF	GO:0043295	glutathione binding	IEP	HCCA
MF	GO:0043424	protein histidine kinase binding	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0044003	modulation by symbiont of host process	IEP	HCCA
BP	GO:0044068	modulation by symbiont of host cellular process	IEP	HCCA
BP	GO:0044242	cellular lipid catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0044403	biological process involved in symbiotic interaction	IEP	HCCA
BP	GO:0045730	respiratory burst	IEP	HCCA
BP	GO:0046395	carboxylic acid catabolic process	IEP	HCCA
BP	GO:0046942	carboxylic acid transport	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:0051701	biological process involved in interaction with host	IEP	HCCA
BP	GO:0051709	regulation of killing of cells of another organism	IEP	HCCA
BP	GO:0051712	positive regulation of killing of cells of another organism	IEP	HCCA
BP	GO:0051788	response to misfolded protein	IEP	HCCA
BP	GO:0052031	modulation by symbiont of host defense response	IEP	HCCA
BP	GO:0052040	modulation by symbiont of host programmed cell death	IEP	HCCA
BP	GO:0052042	induction by symbiont of host programmed cell death	IEP	HCCA
BP	GO:0052158	modulation by symbiont of host resistance gene-dependent defense response	IEP	HCCA
BP	GO:0052167	modulation by symbiont of host innate immune response	IEP	HCCA
BP	GO:0052173	response to defenses of other organism	IEP	HCCA
BP	GO:0052200	response to host defenses	IEP	HCCA
BP	GO:0052390	induction by symbiont of host innate immune response	IEP	HCCA
BP	GO:0052542	defense response by callose deposition	IEP	HCCA
BP	GO:0052545	callose localization	IEP	HCCA
BP	GO:0052553	modulation by symbiont of host immune response	IEP	HCCA
BP	GO:0052559	induction by symbiont of host immune response	IEP	HCCA
BP	GO:0052572	response to host immune response	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0071229	cellular response to acid chemical	IEP	HCCA
BP	GO:0071462	cellular response to water stimulus	IEP	HCCA
BP	GO:0072329	monocarboxylic acid catabolic process	IEP	HCCA
MF	GO:0072341	modified amino acid binding	IEP	HCCA
BP	GO:0075136	response to host	IEP	HCCA
BP	GO:0080129	proteasome core complex assembly	IEP	HCCA
BP	GO:0080185	effector-mediated induction of plant hypersensitive response by symbiont	IEP	HCCA
BP	GO:0090066	regulation of anatomical structure size	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
BP	GO:0140404	effector-mediated modulation of host innate immune response by symbiont	IEP	HCCA
BP	GO:0140415	effector-mediated modulation of host defenses by symbiont	IEP	HCCA
BP	GO:0140418	effector-mediated modulation of host process by symbiont	IEP	HCCA
MF	GO:1900750	oligopeptide binding	IEP	HCCA
MF	GO:1901149	salicylic acid binding	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA
MF	GO:1901681	sulfur compound binding	IEP	HCCA
BP	GO:1901698	response to nitrogen compound	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA
BP	GO:1903509	liposaccharide metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011659	PD40	443	473
IPR011659	PD40	487	515
IPR002469	Peptidase_S9B_N	8	156

External Links

No external refs found!

AT4G01870

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation