AT4G00620

Description : Amino acid dehydrogenase family protein

Gene families : OG0000959 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000959_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G00620

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00077p00189080	evm_27.TU.AmTr_v1...	Coenzyme metabolism.tetrahydrofolate...	0.05	OrthoFinder output from all 47 species
Azfi_s0017.g014703	No alias	EC_3.5 hydrolase acting on carbon-nitrogen bond, other...	0.04	OrthoFinder output from all 47 species
Azfi_s0019.g015179	No alias	EC_3.5 hydrolase acting on carbon-nitrogen bond, other...	0.04	OrthoFinder output from all 47 species
Cba_g01811	No alias	EC_3.5 hydrolase acting on carbon-nitrogen bond, other...	0.04	OrthoFinder output from all 47 species
Dcu_g09456	No alias	EC_3.5 hydrolase acting on carbon-nitrogen bond, other...	0.03	OrthoFinder output from all 47 species
Dde_g08228	No alias	EC_3.5 hydrolase acting on carbon-nitrogen bond, other...	0.04	OrthoFinder output from all 47 species
LOC_Os02g02850.1	LOC_Os02g02850	bifunctional 5,10-methylene-THF dehydrogenase and...	0.03	OrthoFinder output from all 47 species
LOC_Os09g15810.1	LOC_Os09g15810	bifunctional 5,10-methylene-THF dehydrogenase and...	0.03	OrthoFinder output from all 47 species
MA_112201g0010	No alias	bifunctional 5,10-methylene-THF dehydrogenase and...	0.07	OrthoFinder output from all 47 species
Msp_g27480	No alias	EC_3.5 hydrolase acting on carbon-nitrogen bond, other...	0.03	OrthoFinder output from all 47 species
Nbi_g29095	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g12835	No alias	EC_3.5 hydrolase acting on carbon-nitrogen bond, other...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018657	No alias	EC_3.5 hydrolase acting on carbon-nitrogen bond, other...	0.02	OrthoFinder output from all 47 species
Spa_g10942	No alias	EC_3.5 hydrolase acting on carbon-nitrogen bond, other...	0.04	OrthoFinder output from all 47 species
Spa_g15029	No alias	EC_3.5 hydrolase acting on carbon-nitrogen bond, other...	0.03	OrthoFinder output from all 47 species
Tin_g17581	No alias	EC_3.5 hydrolase acTing on carbon-nitrogen bond, other...	0.03	OrthoFinder output from all 47 species
Zm00001e025246_P001	Zm00001e025246	bifunctional 5,10-methylene-THF dehydrogenase and...	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006575	cellular modified amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006760	folic acid-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009396	folic acid-containing compound biosynthetic process	ISS	Interproscan
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042398	cellular modified amino acid biosynthetic process	None	Extended
BP	GO:0042558	pteridine-containing compound metabolic process	None	Extended
BP	GO:0042559	pteridine-containing compound biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000105	histidine biosynthetic process	IEP	HCCA
MF	GO:0000107	imidazoleglycerol-phosphate synthase activity	IEP	HCCA
CC	GO:0000151	ubiquitin ligase complex	IEP	HCCA
MF	GO:0004070	aspartate carbamoyltransferase activity	IEP	HCCA
CC	GO:0005829	cytosol	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006220	pyrimidine nucleotide metabolic process	IEP	HCCA
BP	GO:0006221	pyrimidine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006547	histidine metabolic process	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008170	N-methyltransferase activity	IEP	HCCA
MF	GO:0008276	protein methyltransferase activity	IEP	HCCA
BP	GO:0008283	cell population proliferation	IEP	HCCA
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009218	pyrimidine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009220	pyrimidine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
CC	GO:0009532	plastid stroma	IEP	HCCA
CC	GO:0009570	chloroplast stroma	IEP	HCCA
BP	GO:0009644	response to high light intensity	IEP	HCCA
BP	GO:0009965	leaf morphogenesis	IEP	HCCA
BP	GO:0010015	root morphogenesis	IEP	HCCA
BP	GO:0016036	cellular response to phosphate starvation	IEP	HCCA
MF	GO:0016273	arginine N-methyltransferase activity	IEP	HCCA
MF	GO:0016274	protein-arginine N-methyltransferase activity	IEP	HCCA
MF	GO:0016597	amino acid binding	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0016743	carboxyl- or carbamoyltransferase activity	IEP	HCCA
MF	GO:0016763	pentosyltransferase activity	IEP	HCCA
BP	GO:0018022	peptidyl-lysine methylation	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0034968	histone lysine methylation	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0042542	response to hydrogen peroxide	IEP	HCCA
MF	GO:0043177	organic acid binding	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	HCCA
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	HCCA
CC	GO:0080008	Cul4-RING E3 ubiquitin ligase complex	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR020631	THF_DH/CycHdrlase_NAD-bd_dom	190	355
IPR020630	THF_DH/CycHdrlase_cat_dom	71	187

External Links

No external refs found!

AT4G00620

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation