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  5. AT4G00060

AT4G00060 (MEE44)


Aliases : MEE44

Description : Nucleotidyltransferase family protein


Gene families : OG0004619 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004619_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G00060
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00100050 MEE44,... No description available 0.04 OrthoFinder output from all 47 species
Adi_g010448 MEE44 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39058 MEE44 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19743 MEE44 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g06425 MEE44 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene14167.t1 MEE44, Aspi01Gene14167 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14169.t1 MEE44, Aspi01Gene14169 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14171.t1 MEE44, Aspi01Gene14171 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g013806 MEE44 not classified & original description: CDS=19-5049 0.02 OrthoFinder output from all 47 species
Ceric.11G072500.1 MEE44, Ceric.11G072500 not classified & original description: pacid=50595400... 0.14 OrthoFinder output from all 47 species
Dcu_g06526 MEE44 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g30061 MEE44 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018154001 MEE44 No description available 0.21 OrthoFinder output from all 47 species
Gb_00149 MEE44 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g45800.1 MEE44, LOC_Os06g45800 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Lfl_g08716 MEE44 not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_354975g0010 MEE44 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9969507g0010 MEE44 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g23120.1 MEE44 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Ore_g19686 MEE44 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Pp3c16_11310V3.1 MEE44, Pp3c16_11310 Nucleotidyltransferase family protein 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002874 MEE44 not classified & original description: CDS=772-5031 0.09 OrthoFinder output from all 47 species
Sam_g26689 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g090860.3.1 MEE44, Solyc01g090860 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Zm00001e030357_P002 MEE44, Zm00001e030357 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0009793 embryo development ending in seed dormancy IMP Interproscan
MF GO:0016779 nucleotidyltransferase activity ISS Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
MF GO:0000976 transcription cis-regulatory region binding IEP HCCA
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP HCCA
MF GO:0000979 RNA polymerase II core promoter sequence-specific DNA binding IEP HCCA
MF GO:0001046 core promoter sequence-specific DNA binding IEP HCCA
MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004430 1-phosphatidylinositol 4-kinase activity IEP HCCA
CC GO:0005847 mRNA cleavage and polyadenylation specificity factor complex IEP HCCA
CC GO:0005849 mRNA cleavage factor complex IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0009292 horizontal gene transfer IEP HCCA
BP GO:0009294 DNA-mediated transformation IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
CC GO:0009527 plastid outer membrane IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
CC GO:0009707 chloroplast outer membrane IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
BP GO:0009887 animal organ morphogenesis IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
BP GO:0009908 flower development IEP HCCA
BP GO:0010019 chloroplast-nucleus signaling pathway IEP HCCA
BP GO:0010053 root epidermal cell differentiation IEP HCCA
BP GO:0010090 trichome morphogenesis IEP HCCA
BP GO:0010093 specification of floral organ identity IEP HCCA
BP GO:0010199 organ boundary specification between lateral organs and the meristem IEP HCCA
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010638 positive regulation of organelle organization IEP HCCA
CC GO:0012506 vesicle membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016441 post-transcriptional gene silencing IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0016926 protein desumoylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019216 regulation of lipid metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0030054 cell junction IEP HCCA
CC GO:0030659 cytoplasmic vesicle membrane IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0035194 RNA-mediated post-transcriptional gene silencing IEP HCCA
CC GO:0035619 root hair tip IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0040029 epigenetic regulation of gene expression IEP HCCA
BP GO:0040034 regulation of development, heterochronic IEP HCCA
BP GO:0042743 hydrogen peroxide metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0043424 protein histidine kinase binding IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0048015 phosphatidylinositol-mediated signaling IEP HCCA
BP GO:0048017 inositol lipid-mediated signaling IEP HCCA
BP GO:0048367 shoot system development IEP HCCA
BP GO:0048469 cell maturation IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0048608 reproductive structure development IEP HCCA
BP GO:0048731 system development IEP HCCA
BP GO:0048764 trichoblast maturation IEP HCCA
BP GO:0048765 root hair cell differentiation IEP HCCA
BP GO:0048768 root hair cell tip growth IEP HCCA
BP GO:0048859 formation of anatomical boundary IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0050665 hydrogen peroxide biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050994 regulation of lipid catabolic process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
CC GO:0051286 cell tip IEP HCCA
BP GO:0052543 callose deposition in cell wall IEP HCCA
MF GO:0052742 phosphatidylinositol kinase activity IEP HCCA
CC GO:0060187 cell pole IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071695 anatomical structure maturation IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0090213 regulation of radial pattern formation IEP HCCA
BP GO:0090567 reproductive shoot system development IEP HCCA
BP GO:0090627 plant epidermal cell differentiation IEP HCCA
BP GO:0090691 formation of plant organ boundary IEP HCCA
BP GO:0090701 specification of plant organ identity IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903409 reactive oxygen species biosynthetic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR002934 Polymerase_NTP_transf_dom 1137 1188
No external refs found!