AT3G62680 (ATPRP3, PRP3)

Aliases : ATPRP3, PRP3

Description : proline-rich protein 3

Gene families : OG0001735 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001735_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G62680

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00068p00169090	evm_27.TU.AmTr_v1...	Non-classical arabinogalactan protein 31 OS=Arabidopsis thaliana	0.08	OrthoFinder output from all 47 species
AT2G33790	AGP30, ATAGP30	arabinogalactan protein 30	0.08	OrthoFinder output from all 47 species
Als_g36044	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g39886	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aop_g67154	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene24223.t1	Aspi01Gene24223	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0015.g013920	No alias	not classified & original description: CDS=174-731	0.03	OrthoFinder output from all 47 species
Ceric.02G038400.1	Ceric.02G038400	not classified & original description: pacid=50585766...	0.11	OrthoFinder output from all 47 species
Ceric.02G099000.1	Ceric.02G099000	not classified & original description: pacid=50584642...	0.08	OrthoFinder output from all 47 species
Ceric.13G058200.1	Ceric.13G058200	not classified & original description: pacid=50635929...	0.09	OrthoFinder output from all 47 species
Ceric.16G041100.1	Ceric.16G041100	not classified & original description: pacid=50589734...	0.06	OrthoFinder output from all 47 species
Ceric.24G024000.1	Ceric.24G024000	not classified & original description: pacid=50629899...	0.05	OrthoFinder output from all 47 species
Ceric.24G030400.1	Ceric.24G030400	not classified & original description: pacid=50628660...	0.07	OrthoFinder output from all 47 species
Ceric.31G038000.1	Ceric.31G038000	not classified & original description: pacid=50574287...	0.1	OrthoFinder output from all 47 species
Ceric.36G063000.1	AGP31, Ceric.36G063000	not classified & original description: pacid=50568982...	0.05	OrthoFinder output from all 47 species
Ceric.36G064300.1	Ceric.36G064300	not classified & original description: pacid=50568062...	0.04	OrthoFinder output from all 47 species
Ceric.36G064400.1	AGP31, Ceric.36G064400	not classified & original description: pacid=50569173...	0.1	OrthoFinder output from all 47 species
Dcu_g14368	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Dcu_g29649	No alias	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Dcu_g34314	No alias	not classified & original description: none	0.08	OrthoFinder output from all 47 species
GSVIVT01028048001	RHS13	Cell wall.cell wall proteins.hydroxyproline-rich...	0.03	OrthoFinder output from all 47 species
GSVIVT01028049001	RHS13	Cell wall.cell wall proteins.hydroxyproline-rich...	0.04	OrthoFinder output from all 47 species
Gb_09973	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os01g06940.1	LOC_Os01g06940	no hits & (original description: none)	0.11	OrthoFinder output from all 47 species
LOC_Os01g06960.1	LOC_Os01g06960	no hits & (original description: none)	0.11	OrthoFinder output from all 47 species
LOC_Os01g06980.1	LOC_Os01g06980	no hits & (original description: none)	0.11	OrthoFinder output from all 47 species
LOC_Os01g06990.1	LOC_Os01g06990	no hits & (original description: none)	0.11	OrthoFinder output from all 47 species
LOC_Os01g07010.1	LOC_Os01g07010	no hits & (original description: none)	0.09	OrthoFinder output from all 47 species
LOC_Os01g07020.1	LOC_Os01g07020	no hits & (original description: none)	0.11	OrthoFinder output from all 47 species
LOC_Os01g07030.1	LOC_Os01g07030	no hits & (original description: none)	0.11	OrthoFinder output from all 47 species
LOC_Os01g07040.1	LOC_Os01g07040	no hits & (original description: none)	0.11	OrthoFinder output from all 47 species
LOC_Os01g07050.1	LOC_Os01g07050	no hits & (original description: none)	0.12	OrthoFinder output from all 47 species
LOC_Os01g07060.1	LOC_Os01g07060	no hits & (original description: none)	0.14	OrthoFinder output from all 47 species
LOC_Os01g52650.1	LOC_Os01g52650	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
LOC_Os01g52660.1	LOC_Os01g52660	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
LOC_Os05g45460.1	LOC_Os05g45460	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
LOC_Os05g45480.1	LOC_Os05g45480	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
LOC_Os10g39890.1	LOC_Os10g39890	no hits & (original description: none)	0.14	OrthoFinder output from all 47 species
MA_17693g0020	No alias	no hits & (original description: none)	0.07	OrthoFinder output from all 47 species
Nbi_g37237	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g38807	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g48979	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g55385	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g07881	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Ppi_g10621	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Smo422149	No alias	No description available	0.07	OrthoFinder output from all 47 species
Smo422150	No alias	No description available	0.05	OrthoFinder output from all 47 species
Smo429316	No alias	No description available	0.06	OrthoFinder output from all 47 species
Smo431381	No alias	No description available	0.07	OrthoFinder output from all 47 species
Smo431382	No alias	No description available	0.05	OrthoFinder output from all 47 species
Smo449075	No alias	No description available	0.05	OrthoFinder output from all 47 species
Solyc02g078050.4.1	Solyc02g078050	Pistil-specific extensin-like protein OS=Nicotiana...	0.04	OrthoFinder output from all 47 species
Solyc02g078100.3.1	Solyc02g078100	Pistil-specific extensin-like protein OS=Nicotiana...	0.05	OrthoFinder output from all 47 species
Solyc09g008590.4.1	Solyc09g008590	no hits & (original description: none)	0.12	OrthoFinder output from all 47 species
Solyc09g075410.4.1	Solyc09g075410	cell wall glycoprotein	0.13	OrthoFinder output from all 47 species
Spa_g03778	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g28710	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g41356	No alias	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Spa_g41357	No alias	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Spa_g41541	No alias	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Spa_g41974	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Spa_g45815	No alias	not classified & original description: none	0.11	OrthoFinder output from all 47 species
Spa_g57403	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e002269_P001	Zm00001e002269	no hits & (original description: none)	0.09	OrthoFinder output from all 47 species
Zm00001e016825_P001	Zm00001e016825	no hits & (original description: none)	0.08	OrthoFinder output from all 47 species
Zm00001e019925_P001	Zm00001e019925	no hits & (original description: none)	0.08	OrthoFinder output from all 47 species
Zm00001e019927_P001	Zm00001e019927	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
Zm00001e028211_P001	Zm00001e028211	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
Zm00001e032167_P001	Zm00001e032167	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Zm00001e032168_P001	Zm00001e032168	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005618	cell wall	ISS	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007154	cell communication	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009267	cellular response to starvation	None	Extended
CC	GO:0009506	plasmodesma	IDA	Interproscan
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	RCA	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009723	response to ethylene	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	None	Extended
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010053	root epidermal cell differentiation	None	Extended
BP	GO:0010054	trichoblast differentiation	RCA	Interproscan
BP	GO:0010054	trichoblast differentiation	TAS	Interproscan
BP	GO:0016049	cell growth	None	Extended
BP	GO:0021700	developmental maturation	None	Extended
CC	GO:0030054	cell junction	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0031667	response to nutrient levels	None	Extended
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
BP	GO:0031669	cellular response to nutrient levels	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032870	cellular response to hormone stimulus	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042594	response to starvation	None	Extended
BP	GO:0048364	root development	RCA	Interproscan
BP	GO:0048469	cell maturation	None	Extended
BP	GO:0048527	lateral root development	RCA	Interproscan
BP	GO:0048528	post-embryonic root development	None	Extended
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	RCA	Interproscan
BP	GO:0048764	trichoblast maturation	None	Extended
BP	GO:0048765	root hair cell differentiation	RCA	Interproscan
BP	GO:0048767	root hair elongation	RCA	Interproscan
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	RCA	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071310	cellular response to organic substance	None	Extended
BP	GO:0071365	cellular response to auxin stimulus	IEP	Interproscan
BP	GO:0071369	cellular response to ethylene stimulus	IEP	Interproscan
BP	GO:0071495	cellular response to endogenous stimulus	None	Extended
BP	GO:0071496	cellular response to external stimulus	None	Extended
BP	GO:0071695	anatomical structure maturation	None	Extended
BP	GO:0072732	cellular response to calcium ion starvation	IEP	Interproscan
BP	GO:0090627	plant epidermal cell differentiation	None	Extended
BP	GO:0090696	post-embryonic plant organ development	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	HCCA
BP	GO:0000902	cell morphogenesis	IEP	HCCA
MF	GO:0004601	peroxidase activity	IEP	HCCA
MF	GO:0005199	structural constituent of cell wall	IEP	HCCA
MF	GO:0005381	iron ion transmembrane transporter activity	IEP	HCCA
MF	GO:0005385	zinc ion transmembrane transporter activity	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
BP	GO:0006826	iron ion transport	IEP	HCCA
BP	GO:0006829	zinc ion transport	IEP	HCCA
CC	GO:0009505	plant-type cell wall	IEP	HCCA
BP	GO:0009664	plant-type cell wall organization	IEP	HCCA
BP	GO:0009826	unidimensional cell growth	IEP	HCCA
BP	GO:0009827	plant-type cell wall modification	IEP	HCCA
BP	GO:0009828	plant-type cell wall loosening	IEP	HCCA
BP	GO:0009831	plant-type cell wall modification involved in multidimensional cell growth	IEP	HCCA
MF	GO:0009927	histidine phosphotransfer kinase activity	IEP	HCCA
BP	GO:0010106	cellular response to iron ion starvation	IEP	HCCA
BP	GO:0010167	response to nitrate	IEP	HCCA
BP	GO:0010383	cell wall polysaccharide metabolic process	IEP	HCCA
BP	GO:0010410	hemicellulose metabolic process	IEP	HCCA
BP	GO:0010411	xyloglucan metabolic process	IEP	HCCA
BP	GO:0015698	inorganic anion transport	IEP	HCCA
BP	GO:0015706	nitrate transmembrane transport	IEP	HCCA
MF	GO:0016209	antioxidant activity	IEP	HCCA
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
CC	GO:0031225	obsolete anchored component of membrane	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0042547	cell wall modification involved in multidimensional cell growth	IEP	HCCA
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	HCCA
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0048446	petal morphogenesis	IEP	HCCA
BP	GO:0055062	phosphate ion homeostasis	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098661	inorganic anion transmembrane transport	IEP	HCCA
BP	GO:1902025	nitrate import	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT3G62680 (ATPRP3, PRP3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation