AT3G60240 (CUM2, EIF4G)

Aliases : CUM2, EIF4G

No description available

Gene families : OG0001819 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001819_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G60240

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00140630	CUM2, EIF4G,...	Protein biosynthesis.translation initiation.mRNA...	0.08	OrthoFinder output from all 47 species
Adi_g008243	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g017175	CUM2, EIF4G	component *(eIF4G) of eIF4F mRNA unwinding complex &...	0.05	OrthoFinder output from all 47 species
Adi_g054062	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g067767	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g077949	CUM2, EIF4G	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g097564	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g127086	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aev_g29067	CUM2, EIF4G	component *(eIF4G) of eIF4F mRNA unwinding complex &...	0.02	OrthoFinder output from all 47 species
Aev_g34562	CUM2, EIF4G	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g31996	CUM2, EIF4G	component *(eIF4G) of eIF4F mRNA unwinding complex &...	0.06	OrthoFinder output from all 47 species
Als_g29126	CUM2, EIF4G	component *(eIF4G) of eIF4F mRNA unwinding complex &...	0.04	OrthoFinder output from all 47 species
Aob_g02409	CUM2, EIF4G	component *(eIF4G) of eIF4F mRNA unwinding complex &...	0.05	OrthoFinder output from all 47 species
Cba_g37073	CUM2, EIF4G	component *(eIF4G) of eIF4F mRNA unwinding complex &...	0.03	OrthoFinder output from all 47 species
Ceric.10G035100.1	CUM2, EIF4G,...	component *(eIF4G) of eIF4F mRNA unwinding complex &...	0.04	OrthoFinder output from all 47 species
Cre17.g696250	CUM2, EIF4G	Eukaryotic translation initiation factor 4G OS=Triticum aestivum	0.04	OrthoFinder output from all 47 species
Dde_g35168	CUM2, EIF4G	component *(eIF4G) of eIF4F mRNA unwinding complex &...	0.07	OrthoFinder output from all 47 species
Ehy_g14202	CUM2, EIF4G	component *(eIF4G) of eIF4F mRNA unwinding complex &...	0.03	OrthoFinder output from all 47 species
Ehy_g19202	CUM2, EIF4G	component *(eIF4G) of eIF4F mRNA unwinding complex &...	0.03	OrthoFinder output from all 47 species
GSVIVT01018331001	CUM2, EIF4G	Eukaryotic translation initiation factor 4G...	0.12	OrthoFinder output from all 47 species
Gb_05240	CUM2, EIF4G	component eIF4G of eIF4F mRNA unwinding complex	0.06	OrthoFinder output from all 47 species
LOC_Os07g36940.1	CUM2, EIF4G,...	component eIF4G of eIF4F mRNA unwinding complex	0.04	OrthoFinder output from all 47 species
MA_10434326g0020	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_79191g0010	CUM2, EIF4G	component eIF4G of eIF4F mRNA unwinding complex	0.02	OrthoFinder output from all 47 species
Ore_g16128	CUM2, EIF4G	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Ore_g23190	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g43539	CUM2, EIF4G	component *(eIF4G) of eIF4F mRNA unwinding complex &...	0.06	OrthoFinder output from all 47 species
Pir_g18465	CUM2, EIF4G	component *(eIF4G) of eIF4F mRNA unwinding complex &...	0.02	OrthoFinder output from all 47 species
Ppi_g03290	CUM2, EIF4G	component *(eIF4G) of eIF4F mRNA unwinding complex &...	0.04	OrthoFinder output from all 47 species
Solyc01g088700.4.1	CUM2, EIF4G,...	component eIF4G of eIF4F mRNA unwinding complex	0.06	OrthoFinder output from all 47 species
Spa_g07000	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g07001	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g07002	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g18290	CUM2, EIF4G	component *(eIF4G) of eIF4F mRNA unwinding complex &...	0.03	OrthoFinder output from all 47 species
Spa_g50993	CUM2, EIF4G	component *(eIF4G) of eIF4F mRNA unwinding complex &...	0.04	OrthoFinder output from all 47 species
Spa_g55699	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e010537_P001	CUM2, EIF4G,...	component eIF4G of eIF4F mRNA unwinding complex	0.1	OrthoFinder output from all 47 species
Zm00001e035213_P001	CUM2, EIF4G,...	component eIF4G of eIF4F mRNA unwinding complex	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	RCA	Interproscan
BP	GO:0000910	cytokinesis	None	Extended
BP	GO:0000911	cytokinesis by cell plate formation	RCA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003743	translation initiation factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	None	Extended
BP	GO:0007017	microtubule-based process	None	Extended
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009606	tropism	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009615	response to virus	IMP	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009629	response to gravity	None	Extended
BP	GO:0009630	gravitropism	RCA	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	HCCA
BP	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	IEP	HCCA
CC	GO:0000932	P-body	IEP	HCCA
BP	GO:0003006	developmental process involved in reproduction	IEP	HCCA
MF	GO:0003724	RNA helicase activity	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
MF	GO:0004843	cysteine-type deubiquitinase activity	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0005829	cytosol	IEP	HCCA
CC	GO:0005911	cell-cell junction	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
BP	GO:0006006	glucose metabolic process	IEP	HCCA
BP	GO:0006312	mitotic recombination	IEP	HCCA
BP	GO:0006352	DNA-templated transcription initiation	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0007062	sister chromatid cohesion	IEP	HCCA
BP	GO:0007275	multicellular organism development	IEP	HCCA
MF	GO:0008186	ATP-dependent activity, acting on RNA	IEP	HCCA
CC	GO:0009506	plasmodesma	IEP	HCCA
BP	GO:0009756	carbohydrate mediated signaling	IEP	HCCA
BP	GO:0009790	embryo development	IEP	HCCA
BP	GO:0009793	embryo development ending in seed dormancy	IEP	HCCA
BP	GO:0009880	embryonic pattern specification	IEP	HCCA
BP	GO:0010072	primary shoot apical meristem specification	IEP	HCCA
BP	GO:0010154	fruit development	IEP	HCCA
BP	GO:0010182	sugar mediated signaling pathway	IEP	HCCA
BP	GO:0010431	seed maturation	IEP	HCCA
BP	GO:0010629	negative regulation of gene expression	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
BP	GO:0019318	hexose metabolic process	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	HCCA
BP	GO:0022414	reproductive process	IEP	HCCA
CC	GO:0030054	cell junction	IEP	HCCA
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	HCCA
CC	GO:0035770	ribonucleoprotein granule	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
CC	GO:0036464	cytoplasmic ribonucleoprotein granule	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0045595	regulation of cell differentiation	IEP	HCCA
BP	GO:0048366	leaf development	IEP	HCCA
BP	GO:0048825	cotyledon development	IEP	HCCA
BP	GO:0048827	phyllome development	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
CC	GO:0070161	anchoring junction	IEP	HCCA
CC	GO:0080008	Cul4-RING E3 ubiquitin ligase complex	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
BP	GO:0090421	embryonic meristem initiation	IEP	HCCA
CC	GO:0099080	supramolecular complex	IEP	HCCA
MF	GO:0101005	deubiquitinase activity	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT3G60240 (CUM2, EIF4G)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation