1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G58620

AT3G58620 (TTL4)


Aliases : TTL4

Description : tetratricopetide-repeat thioredoxin-like 4


Gene families : OG0000939 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000939_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G58620

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00174p00014780 TTL3, VIT,... Inactive TPR repeat-containing thioredoxin TTL3... 0.04 OrthoFinder output from all 47 species
Ala_g06190 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09492 TTL1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g08772 TTL1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g09603 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G088900.1 TTL3, VIT,... not classified & original description: pacid=50584923... 0.04 OrthoFinder output from all 47 species
Dac_g14546 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g46240 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07058 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01005875001 TPR14 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01014216001 TTL1 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_36115 TTL1 scaffold protein (TTL) of brassinosteroid signalling 0.03 OrthoFinder output from all 47 species
LOC_Os02g51730.1 TPR14, LOC_Os02g51730 Inactive TPR repeat-containing thioredoxin TTL3... 0.04 OrthoFinder output from all 47 species
MA_10426265g0010 TTL1 scaffold protein (TTL) of brassinosteroid signalling 0.02 OrthoFinder output from all 47 species
Nbi_g09362 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g29036 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g28016 TTL3, VIT not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02414 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0113.g020848 TTL1 not classified & original description: CDS=448-3741 0.03 OrthoFinder output from all 47 species
Sam_g13777 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g03799 TTL3, VIT not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g04571 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10854 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11229 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023863_P001 TPR14, Zm00001e023863 Inactive TPR repeat-containing thioredoxin TTL3... 0.03 OrthoFinder output from all 47 species
Zm00001e026052_P001 TTL1, Zm00001e026052 scaffold protein (TTL) of brassinosteroid signalling 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006970 response to osmotic stress IMP Interproscan
BP GO:0016126 sterol biosynthetic process RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001666 response to hypoxia IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0019374 galactolipid metabolic process IEP HCCA
BP GO:0019375 galactolipid biosynthetic process IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031982 vesicle IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
BP GO:0036293 response to decreased oxygen levels IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0070482 response to oxygen levels IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 613 669
IPR019734 TPR_repeat 519 548
IPR001440 TPR_1 485 516
No external refs found!