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  5. AT3G55110

AT3G55110


Description : ABC-2 type transporter family protein


Gene families : OG0000888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000888_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G55110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00181450 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
AMTR_s00031p00236610 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
AMTR_s00060p00208620 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.03 OrthoFinder output from all 47 species
AT1G53270 No alias ABC-2 type transporter family protein 0.04 OrthoFinder output from all 47 species
AT2G37360 No alias ABC-2 type transporter family protein 0.05 OrthoFinder output from all 47 species
AT3G53510 No alias ABC-2 type transporter family protein 0.03 OrthoFinder output from all 47 species
AT3G55090 No alias ABC-2 type transporter family protein 0.06 OrthoFinder output from all 47 species
AT5G13580 No alias ABC-2 type transporter family protein 0.05 OrthoFinder output from all 47 species
AT5G19410 No alias ABC-2 type transporter family protein 0.07 OrthoFinder output from all 47 species
AT5G52860 No alias ABC-2 type transporter family protein 0.04 OrthoFinder output from all 47 species
Aev_g37051 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14907 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene07578.t1 Aspi01Gene07578 subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g03340 No alias subfamily ABCG transporter & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g17500 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000523.27 No alias ABC transporter G family member 9 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g23513 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25490 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g28101 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06955 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003847001 No alias ABC transporter G family member 17 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01014222001 No alias ABC transporter G family member 10 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01022346001 No alias ABC transporter G family member 5 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01028809001 No alias Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
GSVIVT01032625001 No alias Solute transport.primary active transport.ABC... 0.06 OrthoFinder output from all 47 species
GSVIVT01037274001 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Gb_20468 No alias subfamily ABCG transporter 0.08 OrthoFinder output from all 47 species
LOC_Os01g42900.1 LOC_Os01g42900 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os01g61940.1 LOC_Os01g61940 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
LOC_Os03g17350.1 LOC_Os03g17350 subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
LOC_Os05g02890.1 LOC_Os05g02890 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Len_g48614 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g50392 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g26422 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g39649 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_103974g0010 No alias ABC transporter G family member 5 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
MA_10426701g0030 No alias subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
MA_529254g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp1g25240.1 No alias subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Mp2g07990.1 No alias subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Mp5g04860.1 No alias subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Mp5g15770.1 No alias subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Msp_g13417 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11905 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g37386 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26296 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32502 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61308 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31857 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006110 No alias subfamily ABCG transporter & original description: CDS=1-2232 0.04 OrthoFinder output from all 47 species
Smo134275 No alias External stimuli response.biotic... 0.03 OrthoFinder output from all 47 species
Smo88976 No alias Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Solyc03g007690.1.1 Solyc03g007690 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc03g113690.1.1 Solyc03g113690 subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Solyc04g010210.1.1 Solyc04g010210 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Solyc05g054890.4.1 Solyc05g054890 subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Solyc05g056470.1.1 Solyc05g056470 subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Spa_g10980 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29782 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g40276 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001269_P001 Zm00001e001269 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Zm00001e019365_P001 Zm00001e019365 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Zm00001e031556_P001 Zm00001e031556 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0010103 stomatal complex morphogenesis RCA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0001676 long-chain fatty acid metabolic process IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004467 long-chain fatty acid-CoA ligase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009740 gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009937 regulation of gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009938 negative regulation of gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009968 negative regulation of signal transduction IEP HCCA
BP GO:0010025 wax biosynthetic process IEP HCCA
BP GO:0010143 cutin biosynthetic process IEP HCCA
BP GO:0010162 seed dormancy process IEP HCCA
BP GO:0010166 wax metabolic process IEP HCCA
BP GO:0010325 raffinose family oligosaccharide biosynthetic process IEP HCCA
BP GO:0010358 leaf shaping IEP HCCA
BP GO:0010476 gibberellin mediated signaling pathway IEP HCCA
BP GO:0010648 negative regulation of cell communication IEP HCCA
BP GO:0010769 regulation of cell morphogenesis involved in differentiation IEP HCCA
BP GO:0012501 programmed cell death IEP HCCA
MF GO:0015645 fatty acid ligase activity IEP HCCA
MF GO:0016405 CoA-ligase activity IEP HCCA
MF GO:0016411 acylglycerol O-acyltransferase activity IEP HCCA
MF GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0016878 acid-thiol ligase activity IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0022611 dormancy process IEP HCCA
BP GO:0023057 negative regulation of signaling IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
MF GO:0031957 very long-chain fatty acid-CoA ligase activity IEP HCCA
BP GO:0040034 regulation of development, heterochronic IEP HCCA
BP GO:0045595 regulation of cell differentiation IEP HCCA
MF GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity IEP HCCA
BP GO:0048444 floral organ morphogenesis IEP HCCA
BP GO:0048506 regulation of timing of meristematic phase transition IEP HCCA
BP GO:0048509 regulation of meristem development IEP HCCA
BP GO:0048510 regulation of timing of transition from vegetative to reproductive phase IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0080133 midchain alkane hydroxylase activity IEP HCCA
BP GO:0090697 post-embryonic plant organ morphogenesis IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901568 fatty acid derivative metabolic process IEP HCCA
BP GO:1901570 fatty acid derivative biosynthetic process IEP HCCA
BP GO:2000024 regulation of leaf development IEP HCCA
BP GO:2000039 regulation of trichome morphogenesis IEP HCCA
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 404 612
IPR003439 ABC_transporter-like_ATP-bd 92 245
No external refs found!