AT3G51280

Description : Tetratricopeptide repeat (TPR)-like superfamily protein

Gene families : OG0001526 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001526_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G51280
Cluster	HCCA: Cluster_85

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00055p00061150	evm_27.TU.AmTr_v1...	Cell cycle.mitosis and meiosis.meiotic...	0.12	OrthoFinder output from all 47 species
AMTR_s00092p00121800	evm_27.TU.AmTr_v1...	Cell cycle.mitosis and meiosis.meiotic...	0.09	OrthoFinder output from all 47 species
Ala_g26164	No alias	regulatory protein *(SDI) of sulfate homeostasis &...	0.08	OrthoFinder output from all 47 species
Als_g03163	No alias	regulatory protein *(SDI) of sulfate homeostasis &...	0.1	OrthoFinder output from all 47 species
Aop_g13927	No alias	regulatory protein *(SDI) of sulfate homeostasis &...	0.17	OrthoFinder output from all 47 species
Aspi01Gene69354.t1	Aspi01Gene69354	regulatory protein *(SDI) of sulfate homeostasis &...	0.09	OrthoFinder output from all 47 species
Ceric.12G081700.1	Ceric.12G081700	regulatory protein *(SDI) of sulfate homeostasis &...	0.1	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001374.19	No alias	No description available	0.03	OrthoFinder output from all 47 species
Dcu_g10930	No alias	regulatory protein *(SDI) of sulfate homeostasis &...	0.18	OrthoFinder output from all 47 species
GSVIVT01018742001	No alias	Cell cycle.mitosis and meiosis.meiotic...	0.32	OrthoFinder output from all 47 species
GSVIVT01018744001	No alias	Cell cycle.mitosis and meiosis.meiotic...	0.32	OrthoFinder output from all 47 species
Gb_18147	No alias	meiotic exit regulator (MS5/TDM1)	0.15	OrthoFinder output from all 47 species
Gb_23420	No alias	meiotic exit regulator (MS5/TDM1)	0.13	OrthoFinder output from all 47 species
Gb_29997	No alias	meiotic exit regulator (MS5/TDM1)	0.14	OrthoFinder output from all 47 species
Gb_30001	No alias	Protein POLLENLESS 3-LIKE 2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os05g43040.1	LOC_Os05g43040	Protein SULFUR DEFICIENCY-INDUCED 2 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
LOC_Os09g36740.1	LOC_Os09g36740	meiotic exit regulator (MS5/TDM1)	0.19	OrthoFinder output from all 47 species
Len_g03340	No alias	regulatory protein *(SDI) of sulfate homeostasis &...	0.09	OrthoFinder output from all 47 species
Lfl_g39677	No alias	regulatory protein *(SDI) of sulfate homeostasis &...	0.13	OrthoFinder output from all 47 species
MA_10041g0010	No alias	meiotic exit regulator (MS5/TDM1)	0.16	OrthoFinder output from all 47 species
MA_1055870g0010	No alias	Protein POLLENLESS 3-LIKE 2 OS=Arabidopsis thaliana...	0.15	OrthoFinder output from all 47 species
MA_142952g0010	No alias	Protein POLLENLESS 3-LIKE 2 OS=Arabidopsis thaliana...	0.14	OrthoFinder output from all 47 species
MA_248497g0010	No alias	no hits & (original description: none)	0.09	OrthoFinder output from all 47 species
MA_945965g0010	No alias	Protein POLLENLESS 3-LIKE 2 OS=Arabidopsis thaliana...	0.14	OrthoFinder output from all 47 species
Mp3g16860.1	No alias	meiotic exit regulator (MS5/TDM1)	0.18	OrthoFinder output from all 47 species
Msp_g38700	No alias	regulatory protein *(SDI) of sulfate homeostasis &...	0.04	OrthoFinder output from all 47 species
Nbi_g02328	No alias	regulatory protein *(SDI) of sulfate homeostasis &...	0.22	OrthoFinder output from all 47 species
Ore_g42135	No alias	regulatory protein *(SDI) of sulfate homeostasis &...	0.06	OrthoFinder output from all 47 species
Ppi_g18458	No alias	regulatory protein *(SDI) of sulfate homeostasis &...	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0672.g027612	No alias	regulatory protein *(SDI) of sulfate homeostasis &...	0.04	OrthoFinder output from all 47 species
Smo90227	No alias	Cell cycle.mitosis and meiosis.meiotic...	0.12	OrthoFinder output from all 47 species
Solyc02g083640.4.1	Solyc02g083640	meiotic exit regulator (MS5/TDM1)	0.13	OrthoFinder output from all 47 species
Solyc06g075640.2.1	TDM1, MS5, Solyc06g075640	meiotic exit regulator (MS5/TDM1)	0.04	OrthoFinder output from all 47 species
Spa_g24499	No alias	regulatory protein *(SDI) of sulfate homeostasis &...	0.01	OrthoFinder output from all 47 species
Tin_g01966	No alias	regulatory protein *(SDI) of sulfate homeostasis &...	0.03	OrthoFinder output from all 47 species
Zm00001e010252_P001	Zm00001e010252	meiotic exit regulator (MS5/TDM1)	0.15	OrthoFinder output from all 47 species
Zm00001e035992_P002	Zm00001e035992	meiotic exit regulator (MS5/TDM1)	0.15	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	RCA	Interproscan
BP	GO:0006270	DNA replication initiation	RCA	Interproscan
BP	GO:0006275	regulation of DNA replication	RCA	Interproscan
BP	GO:0006304	DNA modification	None	Extended
BP	GO:0006305	DNA alkylation	None	Extended
BP	GO:0006306	DNA methylation	RCA	Interproscan
BP	GO:0006479	protein methylation	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008213	protein alkylation	None	Extended
BP	GO:0008283	cell population proliferation	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016571	histone methylation	None	Extended
BP	GO:0018022	peptidyl-lysine methylation	None	Extended
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034968	histone lysine methylation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044728	DNA methylation or demethylation	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051052	regulation of DNA metabolic process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051567	histone H3-K9 methylation	RCA	Interproscan
BP	GO:0051726	regulation of cell cycle	RCA	Interproscan
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0061647	histone H3-K9 modification	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000075	cell cycle checkpoint signaling	IEP	HCCA
BP	GO:0000212	meiotic spindle organization	IEP	HCCA
BP	GO:0000226	microtubule cytoskeleton organization	IEP	HCCA
CC	GO:0000228	nuclear chromosome	IEP	HCCA
BP	GO:0000278	mitotic cell cycle	IEP	HCCA
BP	GO:0000280	nuclear division	IEP	HCCA
BP	GO:0000712	resolution of meiotic recombination intermediates	IEP	HCCA
CC	GO:0000776	kinetochore	IEP	HCCA
CC	GO:0000793	condensed chromosome	IEP	HCCA
CC	GO:0000794	condensed nuclear chromosome	IEP	HCCA
CC	GO:0000795	synaptonemal complex	IEP	HCCA
BP	GO:0000819	sister chromatid segregation	IEP	HCCA
BP	GO:0000910	cytokinesis	IEP	HCCA
BP	GO:0000911	cytokinesis by cell plate formation	IEP	HCCA
BP	GO:0001708	cell fate specification	IEP	HCCA
BP	GO:0003006	developmental process involved in reproduction	IEP	HCCA
MF	GO:0003712	transcription coregulator activity	IEP	HCCA
MF	GO:0003713	transcription coactivator activity	IEP	HCCA
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0003916	DNA topoisomerase activity	IEP	HCCA
MF	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
CC	GO:0005871	kinesin complex	IEP	HCCA
CC	GO:0005872	minus-end kinesin complex	IEP	HCCA
CC	GO:0005874	microtubule	IEP	HCCA
CC	GO:0005875	microtubule associated complex	IEP	HCCA
CC	GO:0005876	spindle microtubule	IEP	HCCA
BP	GO:0006084	acetyl-CoA metabolic process	IEP	HCCA
BP	GO:0006261	DNA-templated DNA replication	IEP	HCCA
BP	GO:0006265	DNA topological change	IEP	HCCA
BP	GO:0006325	chromatin organization	IEP	HCCA
BP	GO:0006338	chromatin remodeling	IEP	HCCA
BP	GO:0006346	DNA methylation-dependent heterochromatin formation	IEP	HCCA
BP	GO:0006637	acyl-CoA metabolic process	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0006997	nucleus organization	IEP	HCCA
BP	GO:0007000	nucleolus organization	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007049	cell cycle	IEP	HCCA
BP	GO:0007051	spindle organization	IEP	HCCA
BP	GO:0007053	spindle assembly involved in male meiosis	IEP	HCCA
BP	GO:0007088	regulation of mitotic nuclear division	IEP	HCCA
BP	GO:0007093	mitotic cell cycle checkpoint signaling	IEP	HCCA
BP	GO:0007094	mitotic spindle assembly checkpoint signaling	IEP	HCCA
BP	GO:0007346	regulation of mitotic cell cycle	IEP	HCCA
BP	GO:0007349	cellularization	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
MF	GO:0008569	minus-end-directed microtubule motor activity	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
CC	GO:0009330	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex	IEP	HCCA
CC	GO:0009524	phragmoplast	IEP	HCCA
BP	GO:0009558	embryo sac cellularization	IEP	HCCA
BP	GO:0009892	negative regulation of metabolic process	IEP	HCCA
BP	GO:0009909	regulation of flower development	IEP	HCCA
BP	GO:0009957	epidermal cell fate specification	IEP	HCCA
BP	GO:0009971	anastral spindle assembly involved in male meiosis	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
BP	GO:0010103	stomatal complex morphogenesis	IEP	HCCA
CC	GO:0010369	chromocenter	IEP	HCCA
BP	GO:0010389	regulation of G2/M transition of mitotic cell cycle	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010564	regulation of cell cycle process	IEP	HCCA
BP	GO:0010583	response to cyclopentenone	IEP	HCCA
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010629	negative regulation of gene expression	IEP	HCCA
BP	GO:0010639	negative regulation of organelle organization	IEP	HCCA
BP	GO:0010948	negative regulation of cell cycle process	IEP	HCCA
BP	GO:0010965	regulation of mitotic sister chromatid separation	IEP	HCCA
BP	GO:0014070	response to organic cyclic compound	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0016458	obsolete gene silencing	IEP	HCCA
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEP	HCCA
BP	GO:0016572	obsolete histone phosphorylation	IEP	HCCA
MF	GO:0019207	kinase regulator activity	IEP	HCCA
MF	GO:0019887	protein kinase regulator activity	IEP	HCCA
BP	GO:0022402	cell cycle process	IEP	HCCA
BP	GO:0022414	reproductive process	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0030071	regulation of mitotic metaphase/anaphase transition	IEP	HCCA
BP	GO:0030865	cortical cytoskeleton organization	IEP	HCCA
BP	GO:0031047	RNA-mediated gene silencing	IEP	HCCA
BP	GO:0031048	RNA-mediated heterochromatin formation	IEP	HCCA
BP	GO:0031122	cytoplasmic microtubule organization	IEP	HCCA
BP	GO:0031507	heterochromatin formation	IEP	HCCA
BP	GO:0031570	DNA integrity checkpoint signaling	IEP	HCCA
BP	GO:0031577	spindle checkpoint signaling	IEP	HCCA
BP	GO:0032502	developmental process	IEP	HCCA
BP	GO:0032875	regulation of DNA endoreduplication	IEP	HCCA
BP	GO:0033045	regulation of sister chromatid segregation	IEP	HCCA
BP	GO:0033046	negative regulation of sister chromatid segregation	IEP	HCCA
BP	GO:0033047	regulation of mitotic sister chromatid segregation	IEP	HCCA
BP	GO:0033048	negative regulation of mitotic sister chromatid segregation	IEP	HCCA
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0035383	thioester metabolic process	IEP	HCCA
BP	GO:0040029	epigenetic regulation of gene expression	IEP	HCCA
BP	GO:0042023	DNA endoreduplication	IEP	HCCA
BP	GO:0042127	regulation of cell population proliferation	IEP	HCCA
BP	GO:0043622	cortical microtubule organization	IEP	HCCA
BP	GO:0044774	mitotic DNA integrity checkpoint signaling	IEP	HCCA
BP	GO:0044786	cell cycle DNA replication	IEP	HCCA
BP	GO:0045786	negative regulation of cell cycle	IEP	HCCA
BP	GO:0045814	negative regulation of gene expression, epigenetic	IEP	HCCA
BP	GO:0045839	negative regulation of mitotic nuclear division	IEP	HCCA
BP	GO:0045841	negative regulation of mitotic metaphase/anaphase transition	IEP	HCCA
BP	GO:0045930	negative regulation of mitotic cell cycle	IEP	HCCA
BP	GO:0048285	organelle fission	IEP	HCCA
BP	GO:0048449	floral organ formation	IEP	HCCA
BP	GO:0048451	petal formation	IEP	HCCA
BP	GO:0048453	sepal formation	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA
BP	GO:0048580	regulation of post-embryonic development	IEP	HCCA
BP	GO:0048646	anatomical structure formation involved in morphogenesis	IEP	HCCA
BP	GO:0048831	regulation of shoot system development	IEP	HCCA
BP	GO:0048869	cellular developmental process	IEP	HCCA
BP	GO:0050793	regulation of developmental process	IEP	HCCA
BP	GO:0051129	negative regulation of cellular component organization	IEP	HCCA
BP	GO:0051225	spindle assembly	IEP	HCCA
BP	GO:0051239	regulation of multicellular organismal process	IEP	HCCA
BP	GO:0051258	protein polymerization	IEP	HCCA
BP	GO:0051783	regulation of nuclear division	IEP	HCCA
BP	GO:0051784	negative regulation of nuclear division	IEP	HCCA
BP	GO:0051983	regulation of chromosome segregation	IEP	HCCA
BP	GO:0051985	negative regulation of chromosome segregation	IEP	HCCA
BP	GO:0055048	anastral spindle assembly	IEP	HCCA
BP	GO:0070828	heterochromatin organization	IEP	HCCA
BP	GO:0070925	organelle assembly	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA
BP	GO:0071173	spindle assembly checkpoint signaling	IEP	HCCA
BP	GO:0071174	mitotic spindle checkpoint signaling	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0090306	meiotic spindle assembly	IEP	HCCA
BP	GO:0090329	regulation of DNA-templated DNA replication	IEP	HCCA
BP	GO:0090626	plant epidermis morphogenesis	IEP	HCCA
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	HCCA
BP	GO:0097435	supramolecular fiber organization	IEP	HCCA
CC	GO:0099080	supramolecular complex	IEP	HCCA
CC	GO:0099086	synaptonemal structure	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
BP	GO:0140694	non-membrane-bounded organelle assembly	IEP	HCCA
BP	GO:0140718	facultative heterochromatin formation	IEP	HCCA
BP	GO:1901987	regulation of cell cycle phase transition	IEP	HCCA
BP	GO:1901988	negative regulation of cell cycle phase transition	IEP	HCCA
BP	GO:1901990	regulation of mitotic cell cycle phase transition	IEP	HCCA
BP	GO:1901991	negative regulation of mitotic cell cycle phase transition	IEP	HCCA
BP	GO:1902099	regulation of metaphase/anaphase transition of cell cycle	IEP	HCCA
BP	GO:1902100	negative regulation of metaphase/anaphase transition of cell cycle	IEP	HCCA
BP	GO:1902749	regulation of cell cycle G2/M phase transition	IEP	HCCA
BP	GO:1903046	meiotic cell cycle process	IEP	HCCA
BP	GO:1903047	mitotic cell cycle process	IEP	HCCA
BP	GO:1905393	plant organ formation	IEP	HCCA
BP	GO:1905818	regulation of chromosome separation	IEP	HCCA
BP	GO:1905819	negative regulation of chromosome separation	IEP	HCCA
BP	GO:2000026	regulation of multicellular organismal development	IEP	HCCA
BP	GO:2000241	regulation of reproductive process	IEP	HCCA
BP	GO:2000816	negative regulation of mitotic sister chromatid separation	IEP	HCCA
BP	GO:2001251	negative regulation of chromosome organization	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT3G51280

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation