1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G50190

AT3G50190


Description : Plant protein of unknown function (DUF247)


Gene families : OG0000125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G50190
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00278p00010750 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
Ala_g33018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19103.t1 Aspi01Gene19103 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29768.t1 Aspi01Gene29768 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g36449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16644 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19655 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g27578 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_08678 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_34677 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_37285 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os01g21670.1 LOC_Os01g21670 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os01g38120.1 LOC_Os01g38120 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os08g30520.1 LOC_Os08g30520 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Lfl_g38049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22087 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09735 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g016020.1.1 Solyc04g016020 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc04g017640.1.1 Solyc04g017640 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc05g006690.3.1 Solyc05g006690 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e023471_P002 Zm00001e023471 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e036342_P001 Zm00001e036342 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004789 thiamine-phosphate diphosphorylase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006772 thiamine metabolic process IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
BP GO:0008356 asymmetric cell division IEP HCCA
MF GO:0008902 hydroxymethylpyrimidine kinase activity IEP HCCA
MF GO:0008972 phosphomethylpyrimidine kinase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009228 thiamine biosynthetic process IEP HCCA
BP GO:0009742 brassinosteroid mediated signaling pathway IEP HCCA
BP GO:0009851 auxin biosynthetic process IEP HCCA
BP GO:0009956 radial pattern formation IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP HCCA
BP GO:0019827 stem cell population maintenance IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
BP GO:0034308 primary alcohol metabolic process IEP HCCA
BP GO:0034309 primary alcohol biosynthetic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
BP GO:0043401 steroid hormone mediated signaling pathway IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051457 maintenance of protein location in nucleus IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
BP GO:0098727 maintenance of cell number IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR004158 DUF247_pln 98 476
No external refs found!